Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_H13
(896 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 71 2e-14
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 67 2e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 67 2e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 65 9e-13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 8e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 8e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 54 2e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 31 0.019
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 70.5 bits (165), Expect = 2e-14
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Frame = +1
Query: 13 CRRLILFLLPVSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPDSKIVVNLTL-HLR 189
C RL LL +S C C +R + R + +R K+ VN L ++
Sbjct: 5 CSRLGRILL-ISAVFCVGLCSEDEERLVRDLF-RGYNKLIRPVQNMTEKVHVNFGLAFVQ 62
Query: 190 HANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT 366
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A
Sbjct: 63 LINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD-- 120
Query: 367 AGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 534
G+Y +R + + NG V W+ + ++ + +P D QTC KFGS N D++
Sbjct: 121 -GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
Query: 535 DFVI--DKRIYSM---FESGAWDV 591
+ +K + ++SG WD+
Sbjct: 180 SLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.9 bits (156), Expect = 2e-13
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +1
Query: 70 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVNLTLHLRHANIRESESTVRIQADLQ 243
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 244 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 417
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 418 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.9 bits (156), Expect = 2e-13
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +1
Query: 70 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVNLTLHLRHANIRESESTVRIQADLQ 243
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 244 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 417
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 418 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 64.9 bits (151), Expect = 9e-13
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 369
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 64.1 bits (149), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 369
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 369
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 369
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 62.9 bits (146), Expect = 4e-12
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Frame = +1
Query: 157 KIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 327
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 328 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 498
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 499 KFGSRMHNSDEMDFVIDKRIYSM---FESGAWDVTALSS 606
FGS +H+ +E++ +DK+ + M + WD + +
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKA 224
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 369
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 369
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 546
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 9e-12
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 412 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 537
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 330
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 331 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 507
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 508 SRMHNSDEMD 537
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 411
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 412 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESG 579
++ + + + +P D Q C KFGS ++ ++D + I S +G
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 580 AWDV 591
WD+
Sbjct: 196 EWDL 199
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 402
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 537
G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.1 bits (139), Expect = 3e-11
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Frame = +1
Query: 160 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 327
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 328 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 504
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 505 GSRMHNSDEMD 537
GS ++ ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 330
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 331 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 498
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 499 KFGSRMHNSDEMD 537
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 402
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 537
G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +1
Query: 160 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 337 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 510
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 511 RMHNSDEMD 537
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 199 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 369
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 510
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 53.6 bits (123), Expect = 2e-09
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = +1
Query: 88 RNITVPHDRLAPRNVRSGLPPDSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWI 255
RNIT+ + L + LP K VV + +R + E + + + +W
Sbjct: 35 RNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWR 94
Query: 256 DKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK 426
D RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 95 DSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
Query: 427 RLDISTPISMQLDNWPNDMQTCTFKFGS 510
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.8 bits (116), Expect = 2e-08
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +1
Query: 166 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 342
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 343 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 510
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 511 RMHNSDEM 534
H S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
Frame = +1
Query: 151 DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 321
D +V + L +R A I + + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 322 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 492
+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 493 TFKFGSRMHNSDEMDFV 543
+ + S +D++ F+
Sbjct: 175 SLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Frame = +1
Query: 151 DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 321
D VV + + +R + I + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 322 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 492
+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 493 TFKFGSRMHNSDEMDFV 543
+ + S +D++ F+
Sbjct: 175 SLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 199 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 378
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 379 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 510
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.1 bits (87), Expect = 5e-05
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Frame = +1
Query: 91 NITVPHDRLAPRNVRSGLPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRL 267
+ +V +D+ N G PP + V +T++ L +++ E + + + W D RL
Sbjct: 18 SFSVSYDKRVRPNY--GGPP---VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRL 72
Query: 268 SWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSW 420
++ G T V SE +W PD +N ATT+ ++ R+ ++GS++
Sbjct: 73 AFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITR 128
Query: 421 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 510
RL I+ M L +P D Q C + S
Sbjct: 129 SIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Frame = +1
Query: 91 NITVPHDRLAPRNVRSGLPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRL 267
+ +V +D+ N G PP + V +T++ L +++ E + + W D RL
Sbjct: 18 SFSVSYDKRVRPNY--GGPP---VEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRL 72
Query: 268 SWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSW 420
++ G T V SE +W PD +N ATT+ ++ R+ ++GS++
Sbjct: 73 AFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITR 128
Query: 421 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 510
RL I+ M L +P D Q C + S
Sbjct: 129 SIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 37.5 bits (83), Expect = 2e-04
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 369
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 370 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 540
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 541 V 543
+
Sbjct: 163 I 163
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 250 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 402
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 403 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 510
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Frame = +1
Query: 115 LAPRNVRSGLPP-DSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 285
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 286 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 459
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 460 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 543
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.7 bits (81), Expect = 3e-04
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Frame = +1
Query: 115 LAPRNVRSGLPP-DSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 285
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 286 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 459
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 460 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 543
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.7 bits (81), Expect = 3e-04
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Frame = +1
Query: 115 LAPRNVRSGLPP-DSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 285
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 286 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 459
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 460 LDNWPNDMQTCTFKFGSRMHNSDEMDFV 543
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 486
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 487 TCTFKFGSRMHNSDEMDFVID 549
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.002
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +1
Query: 160 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 333
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 334 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 507
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 508 SRMHNSDEMDFV 543
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 322 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 492
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 493 TFKFGSRMHNSDEM 534
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 30.7 bits (66), Expect = 0.019
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Frame = +1
Query: 133 RSGLPPDSKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGC 294
+ GLP ++V+ + + N I + R+ ++ +WI+ RL + G+
Sbjct: 6 KQGLP----VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYV 61
Query: 295 STWLVSSERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQ 459
+ + LW+PD LNA + AL + S+ N +V + R+ M+
Sbjct: 62 TLPPEFFDSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQME 119
Query: 460 LDNWPNDMQTCTFKFGSRMHNSDEM 534
+P D+Q C S ++ ++
Sbjct: 120 FQLYPMDIQICPIYIESFSYHKQKL 144
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 103 GQ*CCVFAFCRTSYSTSEEKXVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 303 PSAAAPLPCVPTQS 262
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,204
Number of Sequences: 438
Number of extensions: 4718
Number of successful extensions: 89
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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