Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_H11
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 7e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 1e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 47 2e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 43 4e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 6e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 40 4e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 35 9e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.042
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.056
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.5
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.6 bits (133), Expect = 1e-10
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPNVVLLNAAATTAGDYAL-RAR 427
+ L+ W D + W+ E+G T L V SE +W P++VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 428 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+ G V W + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 55.2 bits (127), Expect = 7e-10
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPNVVLLNAAAT---TAGDYALRARVSNNGSVSWI 457
+D+RL++ G+ + + R+W+P+ N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KRLDISTPISMQLDNWPNDMQTC 526
RL I M L+N+P D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.8 bits (121), Expect = 4e-09
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 271
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPNVVLL-NAAATTAGDYALRARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRP++VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 VSWIKRLDISTPISMQLDNWPNDMQTC 526
V W + + ++ +P D QTC
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 51.6 bits (118), Expect = 9e-09
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Frame = +2
Query: 83 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 241
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 242 SESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAAATTAGDYAL 418
T + ++ W D +L WN ++ G T V SE +W P++VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 419 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+A + + G V W + + ++ +P D QTC
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPNVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 469
W E+G L V S+ +WRP++VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 470 ISTPISMQLDNWPNDMQTC 526
+ S+ ++ +P D+QTC
Sbjct: 149 YKSSCSIDVEFFPYDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPNVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 478
W E+G L V S+ +WRP++VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 479 PISMQLDNWPNDMQTC 526
+ ++ +P D QTC
Sbjct: 152 SCEIDVEYFPFDEQTC 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.4 bits (115), Expect = 2e-08
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 305 WNAGEWGCSTWL-VSSERLWRPNVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 469
WN E+G L V SE +W P++VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 470 ISTPISMQLDNWPNDMQTC 526
+ + ++ +P D Q+C
Sbjct: 154 YKSSCEINVEYFPFDEQSC 172
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 49.6 bits (113), Expect = 4e-08
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PNVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
P++VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.8 bits (111), Expect = 6e-08
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 277
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVL--LNAAATTAGDYALRARVSNNGSV 448
+ W L+W + E+ ++ V S +W P++V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 449 SWIKRLDISTPISMQLDN--WPNDMQTCTFXV 538
+ TP+ + D+ WP D+ CT +
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHI 177
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 478
WN E+ G ++ +LW+P++++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 479 PISMQLDNWPNDMQTC 526
+ + +P D Q C
Sbjct: 178 TCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 478
WN E+ G ++ +LW+P++++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 479 PISMQLDNWPNDMQTC 526
+ + +P D Q C
Sbjct: 178 TCKIDITWFPFDDQHC 193
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.0 bits (109), Expect = 1e-07
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 292
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSWNAGEWGCSTWLVSSERLWRPNVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 463
RLS+ S + ER+WRP+ N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LDISTPISMQLDNWPNDMQTC 526
L I M+L N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+P++++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G Y V++NGS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPN 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRP+
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+L N A + VS+ G V W+ + + ++ +P D Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 47.2 bits (107), Expect = 2e-07
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Frame = +2
Query: 74 RFLLTCAIASAAE--CENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-N 232
R+ L AIA AA + +++ LL TY+ E P ++ +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 233 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPNVVLLNAA-ATTAG 406
+ E + L++ W D + WN ++G L + RLW+P+V++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 407 DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
Y V NNG+ ++ + + + +P D Q C
Sbjct: 123 TYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+P++++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+P++++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+P++++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+P++++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+P++++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.4 bits (100), Expect = 1e-06
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +2
Query: 65 FCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHAN 232
F + +LL C ++ T+L + L YD P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 233 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPNVVLLNAAATT--- 400
+ S + + + + + W D LSW ++ G + V S+ +W P++ + N+ T
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQ 141
Query: 401 AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
G V ++GSVS + + + +WP D C
Sbjct: 142 TGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRC 183
Score = 26.6 bits (56), Expect = 0.30
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 507 PTTCRLARFXFGSXMHNSDEMDFVIDKRIYSM 602
P R FGS +H+ +E++ +DK+ + M
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.0 bits (99), Expect = 2e-06
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 287 IDKRLSWNAGEWGCSTWLVSSE---RLWRPNVVLLNAA------ATTAGDYALRARVSNN 439
D RL++ G T V SE +W P+ +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 440 GSVSWIKRLDISTPISMQLDNWPNDMQTC 526
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.7 bits (96), Expect = 4e-06
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 287 IDKRLSWNAGEWGCSTWLVSSE---RLWRPNVVLLNAA------ATTAGDYALRARVSNN 439
D RL++ G T V SE +W P+ +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 440 GSVSWIKRLDISTPISMQLDNWPNDMQTC 526
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.3 bits (95), Expect = 6e-06
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Frame = +2
Query: 140 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 298
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPNVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 463
L +N G T L + R+W P++ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDISTPISMQLDNWPNDMQTCT 529
+ ++ M L +P D Q C+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCS 175
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.5 bits (88), Expect = 4e-05
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Frame = +2
Query: 140 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 298
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPNVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 463
L +N G T L + R+W P++ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LDISTPISMQLDNWPNDMQTCT 529
+ ++ M L +P D Q C+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCS 175
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Frame = +2
Query: 56 LILFCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRH 226
++L + ++ + + +++ I +L YD P+ ++V + L +
Sbjct: 12 ILLQMIHLIAWASLENTGISDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIAS 71
Query: 227 AN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPNVVLLNAAATTA 403
+ I E I L W D+RL+++ E + +E++W P+ N +
Sbjct: 72 FDAISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFL 131
Query: 404 GDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXV 538
D R R+S +GSV++ R + M L +P D Q CT +
Sbjct: 132 HDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 179
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.1 bits (77), Expect = 9e-04
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPNVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W P+ +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPNV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W P+ ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 WIKRLDISTPISMQLDNWPNDMQTCTFXV 538
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPNV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W P+ ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 WIKRLDISTPISMQLDNWPNDMQTCTFXV 538
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 280
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 281 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPNV--VLLNAAATTAGDYALRARVSNNGSVS 451
W D RL + N ++ + + +W P+ ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 452 WIKRLDISTPISMQLDNWPNDMQTCTFXV 538
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.042
Identities = 31/152 (20%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 277
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 278 MNWIDKRLSW--NAGEWGCSTWLVSSERLWRPNVVLLNAAATTAGDYALRAR---VSNNG 442
+W D RL N E + +WRP+ NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 443 SVSWIKRLDISTPISMQLDNWPNDMQTCTFXV 538
++ ++ +L + +M+ +++P+D Q C+ +
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMI 150
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.1 bits (62), Expect = 0.056
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 368 NV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXV 538
+ ++ R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 136 GQ*CCVFAFCRTSYSTSEEKPVTE 65
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 337 PSAAAPFPCVPTQS 296
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,390
Number of Sequences: 438
Number of extensions: 5143
Number of successful extensions: 65
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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