Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_G23
(891 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 9e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 4e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 1e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 4e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 3e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 2e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.005
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 32 0.008
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.100
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.70
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 63.7 bits (148), Expect = 2e-12
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Frame = +3
Query: 84 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 251
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 252 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTXGDYAL---RARVSXNGSVS 419
W D LSW ++ G + V S+ +W PD+ + N+ T + V +GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 420 CIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVIDXRIYXM 569
C+ + +WP D C FGS +H+ +E+ +D + + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.3 bits (147), Expect = 3e-12
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 332
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDVVLLNAAATTXGDYALRAR----VSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTF 500
PD+VL N A G+Y +R + + NG V + + + + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 501 KFGSRMHNSDEMXXVIDXR-----IYXMFKSGAWDVTDL 602
KFGS N D++ + + +KSG WD+ ++
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.7 bits (143), Expect = 9e-12
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 254
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 255 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDYALRARVSXNGSVSCI 425
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 426 KRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 59.7 bits (138), Expect = 4e-11
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +3
Query: 81 CENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILAD 239
C + D LL+ Y+R P S +VV L L L N+++ T +
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW-- 72
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RARVSXNGS 413
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 414 VSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
V + + + +P D QTC KFGS
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 58.8 bits (136), Expect = 6e-11
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Frame = +3
Query: 81 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 245
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 246 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTXGDYALRARVSXNGSV 416
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V +G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 417 SCIKRLDISTPIXMQLDN--WPNDMQTCTFKFGSRMHNSDEM 536
C+ TP+ + D+ WP D+ CT S H S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 273 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDYALRARVSXNGSVSCIKRLDIST 446
WN E+ G ++ +LW+PD+++ N+A G Y V+ NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 447 PIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
+ + +P D Q C KFGS ++ +++ V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 273 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDYALRARVSXNGSVSCIKRLDIST 446
WN E+ G ++ +LW+PD+++ N+A G Y V+ NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 447 PIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
+ + +P D Q C KFGS ++ +++ V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
G Y V+ NGS + + + + +P D Q C KFGS ++ +++ V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.0 bits (134), Expect = 1e-10
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = +3
Query: 81 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 239
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSXNGS 413
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 414 VSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
V + + ++ +P D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.6 bits (133), Expect = 1e-10
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSXNGSVSCIKRLD 437
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 438 ISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEM 536
+ + ++ +P D Q+C KFGS +N ++
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQV 186
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
G Y V+ +GS + + M + +P D Q C KFGS ++ +++ V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
G Y V+ +GS + + M + +P D Q C KFGS ++ +++ V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
G Y V+ +GS + + + + +P D Q C KFGS ++ +++ V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
G Y V+ +GS + + + + +P D Q C KFGS ++ +++ V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVI 548
G Y V+ +GS + + + + +P D Q C KFGS ++ +++ V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 8e-10
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +3
Query: 108 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSXNGSVSCIKRLDIST 446
W E+G L V S+ +WRPD+VL NA A +A + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 447 PIXMQLDNWPNDMQTCTFKFGS 512
+ ++ +P D QTC KFGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSXNGSVSCIKRLD 437
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 438 ISTPIXMQLDNWPNDMQTCTFKFGS 512
+ + ++ +P D+QTC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 52.8 bits (121), Expect = 4e-09
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 266
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 267 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSXNGSVSCIKR 431
L WN ++G T V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPP 138
Query: 432 LDISTPIXMQLDNWPNDMQTCTFKFGS 512
+ + ++ +P D QTC KFGS
Sbjct: 139 AIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 51.6 bits (118), Expect = 9e-09
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSXNGS 413
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 414 VSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXVIDXR----IYXMFKSG 581
+ + + + +P D Q C KFGS ++ ++ + I +G
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 582 AWDV 593
WD+
Sbjct: 196 EWDL 199
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.0 bits (114), Expect = 3e-08
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 96 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 260
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 261 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSXNGSVSCIKR 431
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 432 LDISTPIXMQLDNWPNDMQTCTFKFGS 512
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 2e-07
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Frame = +3
Query: 108 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 266
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 267 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSXNGSVSCIKR 431
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 432 LDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEM 536
+ ++ M L +P D Q C+ + S +D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 162 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 338
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 VVLLNAAATTXGDYALRAR--VSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
+L N A + VS G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Frame = +3
Query: 108 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 266
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 267 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSXNGSVSCIKR 431
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 432 LDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEM 536
+ ++ M L +P D Q C+ + S +D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 254
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 255 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSXN 407
D RL++ G T V SE +W PD +N ATT ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 408 GSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 254
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 255 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSXN 407
D RL++ G T V SE +W PD +N ATT ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 408 GSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +3
Query: 111 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 278
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 279 AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSXNGSVSCIKRLDISTP 449
E + +E++W PD N + D R R+S +GSV+ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 450 IXMQLDNWPNDMQTCTFKFGS 512
M L +P D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.9 bits (79), Expect = 5e-04
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSX 404
W D RL++ G T V SE +W PD +N ATT ++ R+
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 405 NGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.1 bits (72), Expect = 0.004
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 84 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 248
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 249 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSXNGSVS 419
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 420 CIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
+ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.004
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 84 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 248
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 249 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSXNGSVS 419
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 420 CIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
+ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.1 bits (72), Expect = 0.004
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 84 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 248
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 249 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSXNGSVS 419
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 420 CIKRLDISTPIXMQLDNWPNDMQTCTFKFGS 512
+ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.7 bits (71), Expect = 0.005
Identities = 34/165 (20%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Frame = +3
Query: 84 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 245
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 246 MNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALRAR---VSXNG 410
+W D RL N E + +WRPD NA T + ++ + +
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 411 SVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFGSRMHNSDEMXXV 545
++ + +L + M+ +++P+D Q C+ S H + ++ +
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.9 bits (69), Expect = 0.008
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTXGDYALRAR---VSXNGSVSCIKRLDISTPIXMQLDNWPNDMQ 488
+ +WRPD NA + T + + + ++ + +L + M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTFKFGSRMHNSDEM 536
C + S H +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 324 LWRPDVVLLN---AAATTXGDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTC 494
+W P V + N +A T + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 495 TFKFGSRMHNSDEM 536
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 28.3 bits (60), Expect = 0.100
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +3
Query: 162 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 335
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 336 DV--VLLNAAATTXGDYALRARVSXNGSVSCIKRLDISTPIXMQLDNWPNDMQTCTFKFG 509
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 510 S 512
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.70
Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 11/136 (8%)
Frame = +3
Query: 162 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 323
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 324 LWRPDVVLLNAAATTXGDYALRARVS-----XNGSVSCIKRLDISTPIXMQLDNWPNDMQ 488
LW+PD LNA + AL + S N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 489 TCTFKFGSRMHNSDEM 536
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 305 PSAAAPFPCVPTQS 264
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,709
Number of Sequences: 438
Number of extensions: 3690
Number of successful extensions: 89
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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