Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_G21
(872 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 55 1e-09
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.018
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 30 0.032
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 30 0.032
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 29 0.074
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 26 0.52
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 54.8 bits (126), Expect = 1e-09
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +1
Query: 16 VDLKWTPPREDGGAPVEAYIVEKEDKFGNWEKAVE---VPASKTS-ATVPDLIEGQTYEF 183
V L W P DG +P++ Y++E + G+WE ++ VP S+ + A V +L TY
Sbjct: 892 VQLSWAAPY-DGNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGVFNLRPATTYHL 950
Query: 184 RVRAVNKAGPGEPSDSTHPIVAKPRNMAPKIDRTNLIDTKIKVGQKFGFDVKVSGEPMPV 363
R+ A N+ G +PSD+ I A+ P T I+V +KV+ +P P
Sbjct: 951 RIVAENEIGASDPSDTVTIITAEEAPSGP--------PTSIRVDDLDQHTLKVTWKPPPR 1002
Query: 364 TKW 372
W
Sbjct: 1003 EDW 1005
Score = 48.0 bits (109), Expect = 1e-07
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Frame = +1
Query: 37 PREDGGAPVEAYIVEKEDKFGNWEKAVEVPASKTSATVPDLIEGQTYEFRVRAVNKAGPG 216
P AP+ Y + + +FG+W+ A ++ ++ T+ +L+ G Y+ V A N G G
Sbjct: 1388 PHPTDNAPIHGYTIHYKPEFGDWDTA-QISSTVQKYTLENLLCGSRYQIYVTAYNGIGTG 1446
Query: 217 EPSDSTHPIVAKPRNMAPKIDR-----TNLIDTKIKVGQKFGFDV---KVSGEPMPVTKW 372
+PSD + + + P+ R TN I + G + V + +W
Sbjct: 1447 DPSDMLNTRTKGSKPIIPEAARFIEVATNSITLHLNAWSDGGCPMIYFVVEHKKKNQQEW 1506
Query: 373 FLVKKGVKSGGDMKV 417
V VK GG+ V
Sbjct: 1507 NQVSNNVKPGGNFVV 1521
Score = 40.3 bits (90), Expect = 2e-05
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 3/168 (1%)
Frame = +1
Query: 22 LKWTPPREDGGAPVEAYIVEKEDKFGNWEKAVEVPASKTSATVPDLIEGQTYEFRVRAVN 201
+ W PP + G + + K D + +VP ++ + +L + + Y+F V A
Sbjct: 1198 VSWRPPSQPNGVITQYTVYTKADN-AEEPTSQKVPPNQLTHEASELDKTRRYDFWVTAST 1256
Query: 202 KAGPGEPSD--STHPIVAKPRNMAPKIDR-TNLIDTKIKVGQKFGFDVKVSGEPMPVTKW 372
G GE S + P V P +A D+ T +K+ G P P W
Sbjct: 1257 NIGEGEASKIVALAPSVRVPAKIASFDDKFTATYKEDVKL------PCLAVGVPAPEVTW 1310
Query: 373 FLVKKGVKSGGDMKVQHTDYNTKLSCKAATRADSGRYTVTAENSNGKD 516
V+ V D Q + + L K R D+G Y+ EN+ G D
Sbjct: 1311 -KVRGAVLQSSDRLRQLPEGS--LFIKEVDRTDAGEYSCYVENTFGHD 1355
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +1
Query: 442 LSCKAATRADSGRYTVTAENSNGKDXXXXXXXXXXXXXXXGGPLKVSDVHANGATLSW 615
LS K R+DS +T A N+ G D G LKV D LSW
Sbjct: 840 LSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYG-LKVLDKSGRSVQLSW 896
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 397 SGGDMKVQHTDYNTKLSCKAATRADSGRYTVTAENSNG 510
S G + + D + L T +G Y TAEN+ G
Sbjct: 628 SSGVLAKKVADRVSMLMISVITARHAGEYVCTAENAAG 665
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 30.7 bits (66), Expect = 0.018
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 340 VSGEPMPVTKWFLVKKGVKSGGDMKVQHTDYNTKLSCKAATRADSGRYTVTAENSNG 510
V+GEP+P +W + + K TKL K AD+G Y A + G
Sbjct: 425 VAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQASSIGG 481
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 29.9 bits (64), Expect = 0.032
Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 5/170 (2%)
Frame = +1
Query: 22 LKWTPPREDGGAPVE----AYIVEKEDKFGNWEKAVEVPASKTSATVPDLIEGQTYEFRV 189
+ W PP E G + +V+ ++ + ++ + PA T DL + Y+F V
Sbjct: 1232 ISWLPPLEPNGIITKYNLYTRVVDGREELNHGKRTL--PAKNTYFEATDLQQHVEYQFWV 1289
Query: 190 RAVNKAGPGEPSDSTHPIVAKPRNMAPKIDRTNLIDTKIKVGQKFGFDVKVSGEPMPVTK 369
+ G G+ S + P N P R + + + + P +
Sbjct: 1290 TGSTRVGEGQSSKVAAQV---PTNRVPA--RITSFGGHVVRPWRGSATLACNAVGDPTRE 1344
Query: 370 WFLVK-KGVKSGGDMKVQHTDYNTKLSCKAATRADSGRYTVTAENSNGKD 516
W+ + + +++ +Q + +L D G YT EN+ G D
Sbjct: 1345 WYKGQGEQIRTDSTRNIQILP-SGELMLSNLQSQDGGDYTCQVENAQGND 1393
Score = 28.7 bits (61), Expect = 0.074
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +1
Query: 265 APKIDRTNLIDTKIKVGQKFGFDVKVSGEPMPVTKWFLVKKGVKSGGDMKVQ-----HTD 429
AP + + I+ ++ G +G P P W L + + G + H D
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGD 479
Query: 430 YNTKLSCKAATRADSGRYTVTAENSNGK 513
+ ++ D G Y+ AEN GK
Sbjct: 480 VISHVNISHVMVEDGGEYSCMAENRAGK 507
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 439 KLSCKAATRADSGRYTVTAENSNGKD 516
+L +A +DSG Y A N G+D
Sbjct: 871 QLQISSAEASDSGAYFCQASNLYGRD 896
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 29.9 bits (64), Expect = 0.032
Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 5/170 (2%)
Frame = +1
Query: 22 LKWTPPREDGGAPVE----AYIVEKEDKFGNWEKAVEVPASKTSATVPDLIEGQTYEFRV 189
+ W PP E G + +V+ ++ + ++ + PA T DL + Y+F V
Sbjct: 1228 ISWLPPLEPNGIITKYNLYTRVVDGREELNHGKRTL--PAKNTYFEATDLQQHVEYQFWV 1285
Query: 190 RAVNKAGPGEPSDSTHPIVAKPRNMAPKIDRTNLIDTKIKVGQKFGFDVKVSGEPMPVTK 369
+ G G+ S + P N P R + + + + P +
Sbjct: 1286 TGSTRVGEGQSSKVAAQV---PTNRVPA--RITSFGGHVVRPWRGSATLACNAVGDPTRE 1340
Query: 370 WFLVK-KGVKSGGDMKVQHTDYNTKLSCKAATRADSGRYTVTAENSNGKD 516
W+ + + +++ +Q + +L D G YT EN+ G D
Sbjct: 1341 WYKGQGEQIRTDSTRNIQILP-SGELMLSNLQSQDGGDYTCQVENAQGND 1389
Score = 28.7 bits (61), Expect = 0.074
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +1
Query: 265 APKIDRTNLIDTKIKVGQKFGFDVKVSGEPMPVTKWFLVKKGVKSGGDMKVQ-----HTD 429
AP + + I+ ++ G +G P P W L + + G + H D
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGD 479
Query: 430 YNTKLSCKAATRADSGRYTVTAENSNGK 513
+ ++ D G Y+ AEN GK
Sbjct: 480 VISHVNISHVMVEDGGEYSCMAENRAGK 507
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 439 KLSCKAATRADSGRYTVTAENSNGKD 516
+L +A +DSG Y A N G+D
Sbjct: 867 QLQISSAEASDSGAYFCQASNLYGRD 892
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 28.7 bits (61), Expect = 0.074
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +1
Query: 16 VDLKWTPP-REDGGAP--VEAYIVEKEDKFGNWEKAVEVPASKTSATVPDLIEGQTYEFR 186
+ + W P E GG VE Y V ++ + A + S+ SAT L Y +
Sbjct: 435 LSISWDAPITEIGGDSDLVERYEVRCYPRYDDATNATVIQTSELSATFKGLKPSTDYAIQ 494
Query: 187 VRAVNKAGPGE 219
VRA G GE
Sbjct: 495 VRAKTTRGWGE 505
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 25.8 bits (54), Expect = 0.52
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +1
Query: 271 KIDRTNLIDTKIKVGQKFGFDVKVSGEPMPVTKWFLVKKGVK-------SGGDMKVQHTD 429
+I + + + +G+K F +G P P W +K G++ + V +
Sbjct: 23 RIVKASHFELDYMLGRKITFFCMATGFPRPEITW--LKDGIELYHHKFFQVHEWPVGNDT 80
Query: 430 YNTKLSCKAATRADSGRYTVTAENSNGKD 516
+K+ AT+ D+G Y A+N D
Sbjct: 81 LKSKMEIDPATQKDAGYYECQADNQYAVD 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.312 0.132 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,725
Number of Sequences: 438
Number of extensions: 2732
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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