Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_G16
(843 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.14 ||SPBC8E4.10c|adducin|Schizosaccharomyces pombe|chr ... 45 2e-05
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 34 0.029
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 32 0.089
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 29 1.1
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 28 1.4
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 27 2.5
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 27 2.5
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 27 4.4
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 5.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 5.8
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 26 5.8
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 7.7
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 26 7.7
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 7.7
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 26 7.7
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 26 7.7
>SPBC1289.14 ||SPBC8E4.10c|adducin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 324
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 468 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAE--EQVLTSPRGLLPHEVTASSLVKVDM 641
R +LAA YRL L W + +TA++ + L +P GL E+TASSL+KVD
Sbjct: 79 RIELAAAYRLFGLEHWNEN-ILNHLTAKVEEPDGTASFLINPYGLRYGEITASSLIKVDE 137
Query: 642 QGVVXDQGTT 671
G + G T
Sbjct: 138 DGNIKHPGVT 147
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 33.9 bits (74), Expect = 0.029
Identities = 15/62 (24%), Positives = 36/62 (58%)
Frame = +2
Query: 167 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLLQRI 346
EE++E + + D+ D + ME +R+ + +++LF + + + +++ + A LL+ I
Sbjct: 517 EEDEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEI 576
Query: 347 KE 352
+E
Sbjct: 577 EE 578
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 32.3 bits (70), Expect = 0.089
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 86 ENNKLELSEWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRVEALMSS 265
E LELS+ R + R A ++EEE+E ++ + +AD E KR L+
Sbjct: 284 EQGMLELSQDTRESTAEPRAAGEESASEEEEEEEEEEEEENEAD-DETRENKRQNRLV-- 340
Query: 266 KLFREELERVLDQQMHEGGDA--PLLQ 340
+ F ELE + ++ + +A P+L+
Sbjct: 341 REFISELESSIQKRRKDADEATNPILR 367
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 343 PLQERSVAAL-VHLLVEDPFQFFAEQLRGHESF-DALPAFHFADIGVDVGRTLLQAL 179
P+ +R A L + +V+D FQ E+L G S+ D FHF+DI + G + L
Sbjct: 58 PVSDRKDALLNIPTVVDDEFQH-TEELAGVSSWSDFFYLFHFSDIPLIFGTLIFTCL 113
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 218 VREMERRKRVEALMSSKLFREELERVLDQQMHEGG 322
+++ + RK+V A+ + KL +E +E+ +M +GG
Sbjct: 484 LKDSQERKKVSAIRAVKLMKEIVEKKQKLEMEKGG 518
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/67 (20%), Positives = 39/67 (58%)
Frame = +2
Query: 104 LSEWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREE 283
L ++ + ++R ++A E E++ K+R + +++E+E+++++EA + +E+
Sbjct: 84 LGKFQQESEREQKSARKVKRAELEEKLAKRR----EQELQELEKQEKIEAEILESRLQEQ 139
Query: 284 LERVLDQ 304
+ LD+
Sbjct: 140 RKVALDE 146
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +2
Query: 80 YKENNKLELSEWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRVEAL- 256
YKE +R R R ++ED PA++D +V + + E+L
Sbjct: 429 YKERRFERQQRLMREAAARGRNQDAGADLDDEDPESMGIPANVDREVEDQDDLDYYESLD 488
Query: 257 ----MSSKLFRE--ELERVL 298
M+ KL +E +LER L
Sbjct: 489 KKSKMAKKLRKENHDLERDL 508
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +2
Query: 83 KENNKLELSEWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRVEALMS 262
KE K L+ + +R R + A ++ +ERL R + +RE +R+ E L
Sbjct: 31 KEKRKEYLTGFHKRKVERRKHAQVQLEQQKREERLALRKS-----LREQRKRELAERLAF 85
Query: 263 SKLFREELERVLDQQMHE 316
SK LE + E
Sbjct: 86 SKELNSSLENDEESSQQE 103
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 119 RRTQRRSRTAPGPXSTEEEDERLKQRPAD--IDADVREMERRKRV 247
RR + R P T+ EDE+ D DA+ RE+ R +R+
Sbjct: 540 RRNRTAQRVVEIPNETQTEDEQDGTNTPDNRADAEERELTRSQRI 584
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -3
Query: 529 TPVVVQPNKSTSRYTAASLQRSIFSPFSYPMPSIPRMS 416
TP++ NK++ +Y + + F P SY + +I + +
Sbjct: 71 TPLLQSSNKNSDKYNGSLGDKGSFDPNSYGLSAISKQA 108
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 167 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLLQRI 346
E +D+ LK+ I + +++KR++ + +KL +EE+ ++ + E D LL
Sbjct: 71 ELKDQLLKENEGSISS-----KKKKRLDKYIENKLKKEEVASLIAKLAEERIDTSLLSSS 125
Query: 347 KEM 355
K +
Sbjct: 126 KNL 128
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +2
Query: 110 EWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 289
E + R + R + EEE ER ++ + D D ++ +++ + REE+
Sbjct: 949 EEMERIEEEERMLAAQRAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMV 1008
Query: 290 R 292
R
Sbjct: 1009 R 1009
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 7.7
Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -3
Query: 538 CPVTPVVVQPNKSTSRYTAASLQRSIFSPFSYPMPSIPRMSLIGRTQ-LGPPEASGVQSP 362
CP+ P ++ +KST + + + +P P+ +PR L+ + L G +
Sbjct: 203 CPMDPFIIDHSKST--FIDQQVLKLQEAPDMVPVGELPRHILLNADRYLTNQITPGTRCV 260
Query: 361 ADHLLDPLQERSVAALVHLLVEDPF-QFFAEQLRGHESFDALPAF 230
+ Q +SV A + + +P+ + Q+ ++ + P F
Sbjct: 261 ITGIFSIFQNKSVKASGAVAIRNPYIRVVGIQMDSNDGSKSTPLF 305
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 101 RVCCSLYNFYSTSLTDTACTGVIS 30
++C L N Y TDT C GV+S
Sbjct: 793 QLCEKLTNDYLPDWTDTLCIGVVS 816
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 516 SNQTNPPAGTRRPACSVVSSPPS 448
S+ TN P T P+ ++S PPS
Sbjct: 311 SSVTNSPVDTHTPSTPIMSRPPS 333
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 650 DALHVHLDQGRGGHLVGQQT 591
D L + +DQG G L+GQQ+
Sbjct: 368 DPLTLEIDQGSGSQLLGQQS 387
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,842
Number of Sequences: 5004
Number of extensions: 51751
Number of successful extensions: 212
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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