Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_G10
(833 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 5e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 42 7e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 1e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 29 0.040
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.053
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.86
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.1
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 8.0
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.0 bits (99), Expect = 2e-06
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNXGS 448
++ +W D +L W E+G L V S+ +WRPD+VL NA A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 449 VSW 457
V W
Sbjct: 141 VEW 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.0 bits (99), Expect = 2e-06
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNXGS 448
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 449 VSW 457
V W
Sbjct: 137 VEW 139
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 233 NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAA-ATTX 406
++ E A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNXGS 448
G Y V++ GS
Sbjct: 85 GTYQTSVVVTHNGS 98
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 43.6 bits (98), Expect = 2e-06
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSN 439
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 440 XGSVSW 457
G VSW
Sbjct: 143 TGDVSW 148
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +2
Query: 197 IVVNLTLHLRHANIRESESTXRIQADLQMNWIDKRLXWNAXEW-GCXTWLVSSERLWRPD 373
+V L+LH ++ E + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 374 VVLLNAAATTXGDYALRAR--VSNXGSVSW 457
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 41.9 bits (94), Expect = 7e-06
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 197 IVVNLTLHLRHA---NIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLW 364
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 365 RPDVVLLNAAATTXGDYAL-RARVSNXGSVSW 457
PD+VL N A G + +A + G V W
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 1e-05
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSN 439
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYY 137
Query: 440 XGSVSW 457
G V W
Sbjct: 138 SGLVVW 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 40.3 bits (90), Expect = 2e-05
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 161 QRTIGTPPPYSKIVVNLTLHLRHANIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTW 340
+R +G + LTL ++ ++ E L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 341 L-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNXGS 448
L + RLW+PDV++ N+A G Y V N G+
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.9 bits (89), Expect = 3e-05
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 275 LQMNWIDKRLXWNAXEWG-CXTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSN 439
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 440 XGSVSW 457
G V W
Sbjct: 130 TGKVVW 135
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.1 bits (87), Expect = 5e-05
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWR 367
K+ VN L ++ N+ E + L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 368 PDVVLLNAAATTXGDYALR 424
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.5 bits (78), Expect = 6e-04
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 VNLTLHLRHANIRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWL-VSSERLWRPDVV 379
++ L ++H N+ E T L++ W L W + E+ + V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 380 L 382
+
Sbjct: 122 M 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 29.5 bits (63), Expect = 0.040
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +2
Query: 236 IRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWLVSSERLWRPDVVLLN 388
I E + T + + +W+D+RL + + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 465 RLDMXTPISMXLDNGPXDMHTCTFKXGS 548
RL + M L+N P D C + GS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.053
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 200 VVNLTLHLRH-ANIRESESTXRIQADLQMNWIDKRLXWNAXEWGC-XTWLVSSERLWRPD 373
+V + L +R A I + + +Q + W+D+RL +N L + R+W PD
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTDASRVWMPD 119
Query: 374 VVLLN 388
+ N
Sbjct: 120 LFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +2
Query: 236 IRESESTXRIQADLQMNWIDKRLXWNAXEWGCXTWLVSSERLWRPDVVLLN 388
+ E + + + +W D RL + + ER+WRPD N
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +3
Query: 510 PXDMHTCTFKXGSRMHKXDKXXXXXDXXVYRM 605
P D H C GS +H ++ D + M
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 340 PSAAAPLPCVPXQS 299
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 8.0
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +2
Query: 197 IVVNLTLHLRHAN-IRESESTXRIQADLQMNWIDKRLXWN--AXEWGCXTWLVSSE---R 358
++V+ + + N I + R+ ++ +WI+ RL E G + E
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 359 LWRPDVVLLNA 391
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,748
Number of Sequences: 438
Number of extensions: 3747
Number of successful extensions: 48
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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