Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F23
(936 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 7e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 60 4e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 9e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 9e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 57 3e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 5e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 55 1e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 1e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 7e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 7e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 3e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 6e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 7e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.002
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.015
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.015
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.015
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 28 0.11
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.24
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.32
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.3
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.1 bits (144), Expect = 7e-12
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTAGDYAL-RAR 428
+ L+ W D + W+ E+G T L V SE + PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 572
+ G V W + + + +P D QTC KFGS + ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.1 bits (139), Expect = 3e-11
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLRR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++ +
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 533
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 KFGSRMXNSDEMDFVI 581
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 59.7 bits (138), Expect = 4e-11
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLRRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 458
+D+RL++ G+ + + R+ +PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 459 KRLDISTPISMQLDNWPNDMQTCTFKFGS 545
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.4 bits (135), Expect = 9e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +L +PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.4 bits (135), Expect = 9e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +L +PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.0 bits (134), Expect = 1e-10
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 272
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ + RPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 572
V W + + ++ +P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 299
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 300 LSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 464
L WN E+G L V SE + PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 465 LDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 572
+ + ++ +P D Q+C KFGS N ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.8 bits (131), Expect = 3e-10
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.0 bits (129), Expect = 5e-10
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA- 404
++ E + A L++ W+D L WN E+G L ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLRRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLRRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 581
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 8e-10
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLRRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 479
W E+G L V S+ + RPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 480 PISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 572
+ ++ +P D QTC KFGS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 54.8 bits (126), Expect = 1e-09
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 284
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 285 WIDKRLSWNAGEW-GCSTWLVSSERLRRPDVVLLNAAATT---AGDYALRARVSNNGSVS 452
W D LSW ++ G + V S+ + PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 453 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVIDXRIYRM 602
+ + + +WP D C FGS + + +E++ +D + + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.4 bits (125), Expect = 1e-09
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Frame = +3
Query: 87 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 245
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLRRPDVVLLNAAATTAGDYAL- 419
T + ++ W D +L WN ++G T V SE + PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNAD---GNYEVT 120
Query: 420 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 470
W E+G L V S+ + RPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 471 ISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 572
+ S+ ++ +P D+QTC K GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 51.6 bits (118), Expect = 1e-08
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 257
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 258 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLRRPDVVLLNAAATTA-GDYALRARV 431
L++ W D + WN ++G L + RL +PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 432 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 572
NNG+ ++ + + + +P D Q C KFGS + ++D
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.8 bits (116), Expect = 2e-08
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLRRPDVVL--LNAAATTAGDYALRARVSNNGSV 449
+ W L+W + E+ ++ V S + PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 450 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMXNSDEM 569
+ TP+ + D+ WP D+ CT S S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 7e-08
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 293
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGCSTWLVSSERLRRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
RLS+ S + ER+ RPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 465 LDISTPISMQLDNWPNDMQTCTFKFGS 545
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLRRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+ RPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLRRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
L +N G T L + R+ PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFV 578
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 3e-06
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLRRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
L +N G T L + R+ PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFV 578
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 3e-06
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLRR---PDVVLLNAA------ATTAGDYALRARVSNN 440
D RL++ G T V SE ++ PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.3 bits (95), Expect = 6e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLRR---PDVVLLNAA------ATTAGDYALRARVSNN 440
D RL++ G T V SE ++ PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.5 bits (78), Expect = 7e-04
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLRRPDVVLLNAAATTAGDY 413
I E I L W D+RL+++ E + +E++ PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.002
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLRR---PDVVLLNAA------ATTAGDYALRARVSN 437
W D RL++ G T V SE ++ PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.015
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 281
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 282 NWIDKRLSW-NAGEWGCSTWLVSSERLRRPDV--VLLNAAATTAGDYALRARVSNNGSVS 452
W D RL + N ++ + + + PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 453 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.015
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 281
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 282 NWIDKRLSW-NAGEWGCSTWLVSSERLRRPDV--VLLNAAATTAGDYALRARVSNNGSVS 452
W D RL + N ++ + + + PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 453 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.015
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 281
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 282 NWIDKRLSW-NAGEWGCSTWLVSSERLRRPDV--VLLNAAATTAGDYALRARVSNNGSVS 452
W D RL + N ++ + + + PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 453 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 28.3 bits (60), Expect = 0.11
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLRRPDVVLLNAAATTA 404
+I E T L +W D RL N E + + RPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 405 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDF 575
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 576 V 578
+
Sbjct: 163 I 163
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.1 bits (57), Expect = 0.24
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +3
Query: 195 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLRRP 368
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + + P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 369 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 543 S 545
S
Sbjct: 257 S 257
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.32
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 363 RPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 533
RPD NA + T + + + ++ ++ +L + +M +P+D Q C
Sbjct: 120 RPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKL 179
Query: 534 KFGSRMXNSDEMDFVID 584
+ S +DEM F D
Sbjct: 180 QMESLSHTTDEMIFQWD 196
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 338 PSAAAPLPCVPTQS 297
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,193
Number of Sequences: 438
Number of extensions: 4189
Number of successful extensions: 72
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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