Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F20
(719 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.010
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.12
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.22
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.67
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.88
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 3.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.2
SPAC1D4.06c |csk1||cyclin-dependent kinase activating kinase Csk... 26 6.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 8.2
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.010
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 614 PPPPPXPXXXXXGGXXXXXXXXXXXXPPPPPPP 712
PPPPP P G PPPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 0.88
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 614 PPPPPXPXXXXXGGXXXXXXXXXXXXPPPPPP 709
PPPPP P G PPPPPP
Sbjct: 337 PPPPPPPRSNAAGS--IPLPPQGRSAPPPPPP 366
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect(2) = 0.15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 605 PPPPPPPP 628
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 605 PPPPPPPP 628
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect(2) = 0.12
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 608 PPPPPPPXP 634
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 605 PPPPPPPPXP 634
PPPPPPP P
Sbjct: 238 PPPPPPPTLP 247
Score = 23.8 bits (49), Expect(2) = 0.12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 692 PPPPPPP 712
PPPPPPP
Sbjct: 238 PPPPPPP 244
Score = 23.0 bits (47), Expect(2) = 0.15
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 608 PPPPPPPXP 634
P PPPPP P
Sbjct: 236 PAPPPPPPP 244
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.22
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 605 PPPPPPPPXPXXXXXGGXXXXXXXXXXXXPPPPPPP 712
PPPPPP PPPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.1 bits (62), Expect = 0.67
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 605 PPPPPPPPXPXXXXXGGXXXXXXXXXXXXPPPPPPP 712
PPPPPPPP PPPPPPP
Sbjct: 761 PPPPPPPP-------------GVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 608 PPPPPPPXPXXXXXG 652
PPPPPPP P G
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 611 PPPPPPXPXXXXXGG 655
PPPPPP P GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 605 PPPPPPPPXPXXXXXGGXXXXXXXXXXXXPPPPPPP 712
P P P P P GG PPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.1 bits (62), Expect = 0.67
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 608 PPPPPPPXPXXXXXGG 655
PPPPPPP P GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 11/47 (23%)
Frame = +2
Query: 605 PPPPPPPPXPXXXXXG-----------GXXXXXXXXXXXXPPPPPPP 712
P PPPPPP P PPPPPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPP 951
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 0.88
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 605 PPPPPPPPXPXXXXXGGXXXXXXXXXXXXPPPPPPP 712
PPPPPPPP PPPPPPP
Sbjct: 9 PPPPPPPP--------------GFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 605 PPPPPPPP 628
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 605 PPPPPPPP 628
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.2 bits (55), Expect = 4.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 608 PPPPPPPXP 634
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 605 PPPPPPPP 628
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 605 PPPPPPPP 628
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 690 PPPPPPPP 713
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 691 PPPPPPPP 714
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 605 PPPPPPPPXP 634
P PPPPPP P
Sbjct: 3 PAPPPPPPAP 12
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 605 PPPPPPPPXP 634
PPPPPP P P
Sbjct: 5 PPPPPPAPAP 14
>SPAC1D4.06c |csk1||cyclin-dependent kinase activating kinase Csk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 16 ESSSTGWPTGFRLPVALTRLVRNPNNXKXXWEGLKXXPPQXGKIF 150
+ SS GWP+ RL ++ + + PN W L P IF
Sbjct: 211 DGSSEGWPSELRLTSSIIQTLGTPN--PSMWPELSTFPDWNKFIF 253
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 8.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 605 PPPPPPPPXP 634
PPPPPP P P
Sbjct: 356 PPPPPPMPAP 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.153 0.547
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,456,637
Number of Sequences: 5004
Number of extensions: 21383
Number of successful extensions: 367
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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