Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F18
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 32 0.006
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 0.022
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 36 0.023
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 0.046
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 0.046
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 0.047
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 27 0.11
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 34 0.12
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 27 0.13
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 0.14
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 0.14
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 0.14
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.16
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 33 0.16
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 0.17
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 0.26
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 0.26
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.38
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.38
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.66
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.66
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 25 1.4
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 25 1.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 27 1.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 3.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 3.0
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 3.5
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 24 3.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 4.7
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 4.7
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 25 5.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 6.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 6.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 6.2
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 25 7.9
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 28 8.2
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 28 8.2
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 28 8.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 8.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 8.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 8.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 23 9.2
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 744 PXXGGGGGGGGXKXXXFXXXPPPP 673
P GGGGGGGG PPPP
Sbjct: 21 PMAGGGGGGGGCAPAAPACAPPPP 44
Score = 29.1 bits (62), Expect(2) = 0.006
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPP-----PPP 736
GG GGGG PPPPP PPP
Sbjct: 25 GGGGGGGCAPAAPACAPPPPPMCGCAPPP 53
Score = 28.3 bits (60), Expect(2) = 0.006
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 53 PPPPPPPPMCG 63
Score = 27.9 bits (59), Expect(2) = 0.040
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPPP 730
GG GGGG PPPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPP 45
Score = 26.6 bits (56), Expect(2) = 0.040
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 51 PPPPPPPP 58
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect(2) = 0.022
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = -2
Query: 735 GGGGGGGGXKXXXFXXXPPPPXPPGXXXXXXXXXXGAXXPNXRXXXXXXXXXXXXXXXXX 556
GGGG GGG PPPP G G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Query: 555 XXXXGGXXGGGXXPPP 508
GG GGG PPP
Sbjct: 98 GCGGGGGCGGGCAPPP 113
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 736 GGGGGGGGXEXXXFXXXPPPPXP 668
GGGGG GG PPPP P
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPP 59
Score = 28.7 bits (61), Expect(2) = 0.53
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 735 GGGGGGGGXKXXXFXXXPPPPXP 667
GGGGG GG PPPP P
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPP 116
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 735 GGGGGGGGXKXXXFXXXPPPPXPP 664
GGGGGG G PPP PP
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 25.4 bits (53), Expect(2) = 0.022
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2
Query: 744 PXXGGGGGGGG 712
P GGGGGGGG
Sbjct: 21 PSGGGGGGGGG 31
Score = 21.8 bits (44), Expect(2) = 0.53
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 744 PXXGGGGGGGG 712
P GGG GGGG
Sbjct: 59 PACGGGCGGGG 69
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 36.3 bits (80), Expect = 0.023
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 662 PGGXGGGGXXXKXXXFXPPPPPPP 733
P G GGGG + + PPPPPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPP 103
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 744 PXXGGGGGGGGXKXXXFXXXPPPPXPP 664
P GGGGGG G PPPP P
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPPTQP 106
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 769 PPPPPPPPPGG 779
Score = 27.5 bits (58), Expect(2) = 0.046
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 716 PPPPPPPXXGXF 751
PPPPPPP G F
Sbjct: 769 PPPPPPPPPGGF 780
Score = 26.6 bits (56), Expect(2) = 0.046
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 758 PPPPPPPPGG 767
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 719 PPPPPPXXG 745
PPPPPP G
Sbjct: 742 PPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 769 PPPPPPPPPGG 779
Score = 27.5 bits (58), Expect(2) = 0.046
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 716 PPPPPPPXXGXF 751
PPPPPPP G F
Sbjct: 769 PPPPPPPPPGGF 780
Score = 26.6 bits (56), Expect(2) = 0.046
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 758 PPPPPPPP 765
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 758 PPPPPPPPGG 767
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 719 PPPPPPXXG 745
PPPPPP G
Sbjct: 742 PPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 352 PPPPPPPPPGG 362
Score = 27.5 bits (58), Expect(2) = 0.047
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 716 PPPPPPPXXGXF 751
PPPPPPP G F
Sbjct: 352 PPPPPPPPPGGF 363
Score = 26.6 bits (56), Expect(2) = 0.047
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 341 PPPPPPPP 348
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 341 PPPPPPPPGG 350
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 22.6 bits (46), Expect(2) = 6.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 719 PPPPPPXXG 745
PPPPPP G
Sbjct: 325 PPPPPPPGG 333
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 27.5 bits (58), Expect(2) = 0.11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 707 FXPPPPPPPP 736
+ PPPPPPPP
Sbjct: 344 YAPPPPPPPP 353
Score = 25.4 bits (53), Expect(2) = 0.11
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 713 PPPPPPPPXXGXF 751
PPPPPP P G +
Sbjct: 348 PPPPPPHPQQGLY 360
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPPPPPXXG 745
GG GG G PPPPPPPP G
Sbjct: 50 GGGGGCGYGGGYGCGIPPPPPPPPQCG 76
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 733 GGGGGGGXEXXXFXXXPPPPXPP 665
GGGGG G PPPP PP
Sbjct: 50 GGGGGCGYGGGYGCGIPPPPPPP 72
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 736 GGGGGGGGXEXXXFXXXPPPPXPPR 662
GGGGG G PPPP PP+
Sbjct: 50 GGGGGCGYGGGYGCGIPPPPPPPPQ 74
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.5 bits (58), Expect(2) = 0.13
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 680 GGXXXKXXXFXPPPPPPPP 736
GG F PPPPPPP
Sbjct: 102 GGIPPPPPMFGAPPPPPPP 120
Score = 25.0 bits (52), Expect(2) = 0.13
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPP G
Sbjct: 114 PPPPPPPSGLG 124
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect(2) = 0.14
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 65 PPPPPPPPAFG 75
Score = 24.2 bits (50), Expect(2) = 0.14
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 707 FXPPPPPPPP 736
+ PPPPPPP
Sbjct: 62 YGAPPPPPPP 71
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect(2) = 0.14
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 65 PPPPPPPPAFG 75
Score = 24.2 bits (50), Expect(2) = 0.14
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 707 FXPPPPPPPP 736
+ PPPPPPP
Sbjct: 62 YGAPPPPPPP 71
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect(2) = 0.14
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 65 PPPPPPPPAFG 75
Score = 24.2 bits (50), Expect(2) = 0.14
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 707 FXPPPPPPPP 736
+ PPPPPPP
Sbjct: 62 YGAPPPPPPP 71
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPPPPP 736
G GGGG PPPPPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPP 664
G GGGG PPPP PP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPPPPP 736
G GGGG PPPPPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPP 664
G GGGG PPPP PP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPPP 310
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPPPPPXXGXF 751
GG G G PPPPPPPP F
Sbjct: 216 GGGGNNGFFVPVPVVIPPPPPPPPGPNCF 244
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 735 GGGGGGGGXKXXXFXXXPPPPXPPG 661
GGGG G PPPP PPG
Sbjct: 216 GGGGNNGFFVPVPVVIPPPPPPPPG 240
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 577 PPPPPPPPMLG 587
Score = 26.6 bits (56), Expect(2) = 0.17
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 576 PPPPPPPP 583
Score = 25.4 bits (53), Expect(2) = 0.17
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 589 PPPPPPPPGG 598
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(3) = 0.26
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 22.2 bits (45), Expect(3) = 0.26
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPP G
Sbjct: 327 PPPPPPSRFG 336
Score = 21.0 bits (42), Expect(3) = 0.26
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 707 FXPPPPPPP 733
+ P PPPPP
Sbjct: 270 YPPVPPPPP 278
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(3) = 0.26
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 297 PPPPPPPP 304
Score = 22.2 bits (45), Expect(3) = 0.26
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPP G
Sbjct: 317 PPPPPPSRFG 326
Score = 21.0 bits (42), Expect(3) = 0.26
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 707 FXPPPPPPP 733
+ P PPPPP
Sbjct: 260 YPPVPPPPP 268
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 674 GGGGXXXKXXXFXPPPPPPPP 736
GGGG PPPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 674 GGGGXXXKXXXFXPPPPPPPPXXG 745
GGGG PPPPPPP G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIG 74
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 668 GXGGGGXXXKXXXFXPPPPPPPPXXG 745
G GGG PPPPPP P G
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGG 75
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 674 GGGGXXXKXXXFXPPPPPPPP 736
GGGG PPPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 674 GGGGXXXKXXXFXPPPPPPPPXXG 745
GGGG PPPPPPP G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIG 74
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 668 GXGGGGXXXKXXXFXPPPPPPPPXXG 745
G GGG PPPPPP P G
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGG 75
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 662 PGGXGGGGXXXKXXXFXPPPPPPPPXXG 745
PGG GG F PPPPPPPP G
Sbjct: 666 PGGLGG---------FMPPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 662 PGGXGGGGXXXKXXXFXPPPPPPPPXXG 745
PGG GG F PPPPPPPP G
Sbjct: 666 PGGLGG---------FMPPPPPPPPMPG 684
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 713 PPPPPPPPXXGXF 751
PPPPPPPP G +
Sbjct: 39 PPPPPPPPCGGGY 51
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPP G
Sbjct: 54 PPPPPPPSYAG 64
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 707 FXPPPPPPPP 736
+ PPPPPPP
Sbjct: 51 YEAPPPPPPP 60
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 331 PPPPPPPIGG 340
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 713 PPPPPPPP 736
PP PPPPP
Sbjct: 328 PPAPPPPP 335
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 25.4 bits (53), Expect(2) = 1.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 154 PPPPPPPLMG 163
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 707 FXPPPPPPPP 736
+ P PPPPPP
Sbjct: 150 YDPLPPPPPP 159
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 26.6 bits (56), Expect(2) = 1.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPPPPP
Sbjct: 362 PPPPPPPP 369
Score = 21.8 bits (44), Expect(2) = 1.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 707 FXPPPPPPP 733
F PPPPPP
Sbjct: 321 FILPPPPPP 329
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGG G PPPP P G
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYG 219
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPP 727
GG G GG F PPPPP
Sbjct: 197 GGGGSGGSGGGSGRFPPPPPP 217
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 665 GGXGGGGXXXKXXXFXPPPPPP 730
GG GG G PPPPPP
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPP 217
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 113 WGGXXXFPPPXXG-KXFPKCFGGTPPFWGGKNXFSQRGXXF-FKXXGGXG 256
+GG PPP G P+ FGG +GG+ FS+ F GG G
Sbjct: 122 FGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSEAPQGFGNNQQGGFG 171
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 WGGXXXFPPPXXG-KXFPKCFGGTPPFWGGKNXFS 214
+GG PPP G P+ FGG +GG+ FS
Sbjct: 64 FGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFS 98
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 680 GGXXXKXXXFXPPPPPPP 733
GG PPPPPPP
Sbjct: 286 GGSPPPPRAGSPPPPPPP 303
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 719 PPPPPPXXG 745
PPPPPP G
Sbjct: 297 PPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 113 WGGXXXFPPPXXG-KXFPKCFGGTPPFWGGKNXFSQRGXXF-FKXXGGXG 256
+GG PPP G P+ FGG +GG+ FS+ F GG G
Sbjct: 143 FGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSEAPQGFGNNQQGGFG 192
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 WGGXXXFPPPXXG-KXFPKCFGGTPPFWGGKNXFS 214
+GG PPP G P+ FGG +GG+ FS
Sbjct: 85 FGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFS 119
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 680 GGXXXKXXXFXPPPPPPP 733
GG PPPPPPP
Sbjct: 307 GGSPPPPRAGSPPPPPPP 324
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 719 PPPPPPXXG 745
PPPPPP G
Sbjct: 318 PPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 113 WGGXXXFPPPXXG-KXFPKCFGGTPPFWGGKNXFSQRGXXF-FKXXGGXG 256
+GG PPP G P+ FGG +GG+ FS+ F GG G
Sbjct: 128 FGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSEAPQGFGNNQQGGFG 177
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 WGGXXXFPPPXXG-KXFPKCFGGTPPFWGGKNXFS 214
+GG PPP G P+ FGG +GG+ FS
Sbjct: 70 FGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFS 104
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 680 GGXXXKXXXFXPPPPPPP 733
GG PPPPPPP
Sbjct: 292 GGSPPPPRAGSPPPPPPP 309
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 719 PPPPPPXXG 745
PPPPPP G
Sbjct: 303 PPPPPPPRG 311
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 24.2 bits (50), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 716 PPPPPPPXXGXF 751
PPPPPPP F
Sbjct: 576 PPPPPPPPPPSF 587
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 713 PPPPPPPP 736
P PPPPPP
Sbjct: 536 PTPPPPPP 543
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 713 PPPPPPP 733
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 716 PPPPPPP 736
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = -1
Query: 736 GGGGGGGGXE---XXXFXXXPPPPXPP 665
GGGGGGGG E PPP PP
Sbjct: 17 GGGGGGGGGEAGYSGGAGVEAPPPPPP 43
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 716 PPPPPPPXXGXF 751
PPPPPPP F
Sbjct: 792 PPPPPPPFLTCF 803
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 713 PPPPPPPP 736
PPPPP PP
Sbjct: 786 PPPPPVPP 793
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG F P P PG
Sbjct: 337 GGGGGGGGGLDPFTFPPTPTAMPG 360
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG F P P PG
Sbjct: 337 GGGGGGGGGLDPFTFPPTPTAMPG 360
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG F P P PG
Sbjct: 337 GGGGGGGGGLDPFTFPPTPTAMPG 360
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG F P P PG
Sbjct: 337 GGGGGGGGGLDPFTFPPTPTAMPG 360
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 25.4 bits (53), Expect(2) = 5.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2
Query: 744 PXXGGGGGGGG 712
P GGGGGGGG
Sbjct: 7 PSSGGGGGGGG 17
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 729 GGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGG + P P G
Sbjct: 28 GGGGGGIRGFFSKLRKPSDQPNG 50
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 630 PPPPPPPPPMG 640
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 649 PPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 456 PPPPPPPPPMG 466
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 713 PPPPPPPPXXG 745
PPPPPPPP G
Sbjct: 475 PPPPPPPPPSG 485
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 25.4 bits (53), Expect(2) = 7.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 716 PPPPPPPXXG 745
PPPPPPP G
Sbjct: 63 PPPPPPPCGG 72
Score = 21.0 bits (42), Expect(2) = 7.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 662 PGGXGGGG 685
PGG GGGG
Sbjct: 20 PGGGGGGG 27
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 713 PPPPPPPPXXGXF 751
PPPPPPPP F
Sbjct: 247 PPPPPPPPAPSPF 259
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 713 PPPPPPPPXXGXF 751
PPPPPPPP F
Sbjct: 245 PPPPPPPPAPSPF 257
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 188 FWGGKNXFSQRGXXFFKXXGGXGPP 262
F GG+ F RG FF+ G G P
Sbjct: 435 FRGGRGGFQPRGGQFFRRGGSGGAP 459
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG P PP P G
Sbjct: 88 GGGGGGGGGGCDGCCNPGPPGPGG 111
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG P PP P G
Sbjct: 88 GGGGGGGGGGCDGCCNPGPPGPGG 111
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG P PP P G
Sbjct: 88 GGGGGGGGGGCDGCCNPGPPGPGG 111
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 732 GGGGGGGXKXXXFXXXPPPPXPPG 661
GGGGGGG P PP P G
Sbjct: 88 GGGGGGGGGGCDGCCNPGPPGPGG 111
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 23.4 bits (48), Expect(2) = 9.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 736 GGGGGGGG 713
GGGGGGGG
Sbjct: 363 GGGGGGGG 370
Score = 22.6 bits (46), Expect(2) = 9.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -1
Query: 733 GGGGGGGXEXXXFXXXPPPPXPP 665
GGGGGG + P P P
Sbjct: 380 GGGGGGAPQAAPAPQAAPAPAAP 402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,680,358
Number of Sequences: 27780
Number of extensions: 264304
Number of successful extensions: 5777
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2861
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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