Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F15
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.049
Z49909-11|CAA90113.1| 154|Caenorhabditis elegans Hypothetical p... 31 1.1
AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical ... 29 5.6
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 28 7.4
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 7.4
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 9.8
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 9.8
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 28 9.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 9.8
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 9.8
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 35.5 bits (78), Expect = 0.049
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 176 PTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYR--SRRLQMCQFFFPTETC 349
P+ ++CQ+ S+ T TCIR N+ ++ + + R S+ LQ+C T TC
Sbjct: 90 PSCSSCQSACSSACTTPTCIRTCQRNSCSNLCNTGSNSCTNRCNSQCLQICTTPSCTNTC 149
Query: 350 LLSCLLAC 373
SC AC
Sbjct: 150 SNSCSNAC 157
>Z49909-11|CAA90113.1| 154|Caenorhabditis elegans Hypothetical
protein C14A4.9 protein.
Length = 154
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +2
Query: 59 IVAFIPAYRSKRTKIKATTQTTILRVPPLLHDVTLTLRKPTANTCQARTSTHFTGKTCIR 238
+V FI A + +T TT +L TL R PT T Q + TC
Sbjct: 5 VVLFISAITVSNACVPTSTPTTTTPCCSMLSQSTLPRRNPTITTQQQCSVLQRVSSTCPV 64
Query: 239 QRNPNTAASPDTNAPDVL 292
AA+ +TN ++L
Sbjct: 65 DGIVICAAAQETNPDNIL 82
>AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical
protein Y6B3B.11 protein.
Length = 462
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 614 PFVASDGFDENGDRCLK-YLKAPLVDQEDPR*RVLGDVDCFPFCPQDRECSYR 459
P V S D+ ++ L Y++ LVD +PR RVL F C D EC+ +
Sbjct: 85 PAVISTKVDKEVEKRLPMYIQIVLVDVLEPRGRVLKHHVAFVKCSFDDECTMK 137
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/93 (22%), Positives = 44/93 (47%)
Frame = +1
Query: 7 KKRILVLKSRTLNFLNQHSSFYTCVSLEENKN*SHHANYNFTGSTSLTRCYSHTEEANRE 186
K R ++LK++ L+ Q+ F T +++ N + ++ + S R Y+H + +
Sbjct: 28 KARRMLLKAKKLD-PGQNIEFLT-KKIDDMTNNTSSSSQTSSSRASEERSYAHDDHYDDP 85
Query: 187 HLSSTHKHALHRKNLHPPAEPEHRRIARHERTG 285
+L + + +KN EP+ R +R + G
Sbjct: 86 NLRNRKARSPVKKNGKTEPEPKQRSASRTPKLG 118
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 496 KQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTS--KLTLRHSPLSFS 660
+ STS + S +R FKHR+ F S S K +LTLRH + S
Sbjct: 110 QMSTSRRLAGFASRSIRKSQWRLFKHRTFFGSQRSSMKKNQLQLPRLTLRHPSIDSS 166
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 496 KQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTS--KLTLRHSPLSFS 660
+ STS + S +R FKHR+ F S S K +LTLRH + S
Sbjct: 110 QMSTSRRLAGFASRSIRKSQWRLFKHRTFFGSQRSSMKKNQLQLPRLTLRHPSIDSS 166
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 140 PLLHDVTLTLRKPTANTCQARTSTH-----FTGKTCIRQRNPNTAASPDTNAPDVLSYRS 304
P LHDVTL + +AR S T K+ I R P P+ ++PD S S
Sbjct: 1775 PQLHDVTLDKLRDRIEKLEARLSATEKKPVETVKSTIPDR-PEVPEEPEKSSPDRTSRSS 1833
Query: 305 RRLQMCQFFFPTE 343
+L M + TE
Sbjct: 1834 LQLAMEAYGTATE 1846
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 140 PLLHDVTLTLRKPTANTCQARTSTH-----FTGKTCIRQRNPNTAASPDTNAPDVLSYRS 304
P LHDVTL + +AR S T K+ I R P P+ ++PD S S
Sbjct: 1775 PQLHDVTLDKLRDRIEKLEARLSATEKKPVETVKSTIPDR-PEVPEEPEKSSPDRTSRSS 1833
Query: 305 RRLQMCQFFFPTE 343
+L M + TE
Sbjct: 1834 LQLAMEAYGTATE 1846
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Frame = +2
Query: 149 HDVTLT--LRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYRSR----R 310
H T+T L+K A FT KT R + T DV+ + R
Sbjct: 7247 HSTTITDQLQKCQYAFLPAAVFNGFTDKTMSRLESIETLTIGGETVSDVVIETAMKKFPR 7306
Query: 311 LQMCQFFFPTETCLLSCLLAC 373
L+ Q + PTETC+ S C
Sbjct: 7307 LRTIQIYGPTETCIWSLTNKC 7327
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 351 CFLVCLLAGARSHRTCSVIGTTSIKRHDTRTLSSWPPVTTFPILRTEW 494
CF ++ G TC G T HD T + PP+T IL EW
Sbjct: 468 CFCCPVVQGYGLTETCG--GGTIADIHDLSTGTVGPPLTCCEILLQEW 513
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 479 PADRMESSRRRPKHVISDPPDP 544
P ++RRR +HV+S PP P
Sbjct: 4 PVVEFTTARRRKRHVVSTPPPP 25
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 140 PLLHDVTLTLRKPTANTCQARTSTH-----FTGKTCIRQRNPNTAASPDTNAPDVLSYRS 304
P LHDVTL + +AR S T K+ I R P P+ ++PD S S
Sbjct: 1775 PQLHDVTLDKLRDRIEKLEARLSATEKKPVETVKSTIPDR-PEVPEEPEKSSPDRTSRSS 1833
Query: 305 RRLQMCQFFFPTE 343
+L M + TE
Sbjct: 1834 LQLAMEAYGTATE 1846
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,846,024
Number of Sequences: 27780
Number of extensions: 382371
Number of successful extensions: 1073
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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