Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F09
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5 (od... 27 0.72
AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5 pr... 27 0.72
Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9 pro... 27 2.0
AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9 p... 27 2.0
AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein. 27 2.0
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 32 2.6
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 32 2.6
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 32 2.6
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 32 2.6
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 32 2.6
BC016169-1|AAH16169.1| 333|Homo sapiens GIPC PDZ domain contain... 31 6.1
BC012810-1|AAH12810.1| 333|Homo sapiens GIPC PDZ domain contain... 31 6.1
BC004226-1|AAH04226.2| 300|Homo sapiens GIPC1 protein protein. 31 6.1
BC000410-1|AAH00410.1| 333|Homo sapiens GIPC PDZ domain contain... 31 6.1
AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critic... 31 6.1
AF089816-1|AAC67548.1| 333|Homo sapiens RGS-GAIP interacting pr... 31 6.1
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 27 7.6
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 30 8.0
>AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5
(odd-paired homolog, Drosophila) protein.
Length = 663
Score = 26.6 bits (56), Expect(2) = 0.72
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 165 PPPPPPPP 172
Score = 25.8 bits (54), Expect(2) = 0.72
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
GG G PPPP PP
Sbjct: 140 GGSSGAQPSAPPPPAPP 156
>AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5
protein protein.
Length = 639
Score = 26.6 bits (56), Expect(2) = 0.72
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 141 PPPPPPPP 148
Score = 25.8 bits (54), Expect(2) = 0.72
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
GG G PPPP PP
Sbjct: 116 GGSSGAQPSAPPPPAPP 132
>Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 82 PPPPPPPP 89
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
G PPPPPPP
Sbjct: 61 GAAAAALLLHPPPPPPP 77
>AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 82 PPPPPPPP 89
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
G PPPPPPP
Sbjct: 61 GAAAAALLLHPPPPPPP 77
>AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein.
Length = 729
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 82 PPPPPPPP 89
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
G PPPPPPP
Sbjct: 61 GAAAAALLLHPPPPPPP 77
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPP 403
Score = 31.1 bits (67), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPPP 404
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPP 403
Score = 31.1 bits (67), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPPP 404
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPP 403
Score = 31.1 bits (67), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPPP 404
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 399 GAGGPPMPPPPPPPPPP 415
Score = 31.1 bits (67), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 399 GAGGPPMPPPPPPPPPPP 416
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPP 403
Score = 31.1 bits (67), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
G GG PPPPPPPP
Sbjct: 387 GAGGPPMPPPPPPPPPPP 404
>BC016169-1|AAH16169.1| 333|Homo sapiens GIPC PDZ domain containing
family, member 1 protein.
Length = 333
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 663 GGGGGGGXXXXXPPPPP 613
GGGG GG PPPPP
Sbjct: 36 GGGGSGGPQMGLPPPPP 52
>BC012810-1|AAH12810.1| 333|Homo sapiens GIPC PDZ domain containing
family, member 1 protein.
Length = 333
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 663 GGGGGGGXXXXXPPPPP 613
GGGG GG PPPPP
Sbjct: 36 GGGGSGGPQMGLPPPPP 52
>BC004226-1|AAH04226.2| 300|Homo sapiens GIPC1 protein protein.
Length = 300
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 663 GGGGGGGXXXXXPPPPP 613
GGGG GG PPPPP
Sbjct: 3 GGGGSGGPQMGLPPPPP 19
>BC000410-1|AAH00410.1| 333|Homo sapiens GIPC PDZ domain containing
family, member 1 protein.
Length = 333
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 663 GGGGGGGXXXXXPPPPP 613
GGGG GG PPPPP
Sbjct: 36 GGGGSGGPQMGLPPPPP 52
>AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critical
region candidate gene number 6 protein.
Length = 578
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
GG G PPPPPPPP
Sbjct: 532 GGYGAPPSAPPPPPPPP 548
>AF089816-1|AAC67548.1| 333|Homo sapiens RGS-GAIP interacting
protein GIPC protein.
Length = 333
Score = 30.7 bits (66), Expect = 6.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 663 GGGGGGGXXXXXPPPPP 613
GGGG GG PPPPP
Sbjct: 36 GGGGSGGPQMGLPPPPP 52
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 26.6 bits (56), Expect(2) = 7.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 73 PPPPPPPP 80
Score = 22.2 bits (45), Expect(2) = 7.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPP 663
G G PPPPPP
Sbjct: 37 GPGAGLLAPGPPPPPP 52
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 30.3 bits (65), Expect = 8.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGG G PPPP PPP
Sbjct: 74 GGGAGAFYPVPPPPLPPP 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,306,607
Number of Sequences: 237096
Number of extensions: 2235462
Number of successful extensions: 55304
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21186
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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