Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F09
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 33 0.23
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 33 0.23
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.69
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 0.69
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 0.91
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 0.91
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.91
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.91
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.91
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 1.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 1.6
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 2.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 2.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 2.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 2.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 2.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 2.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 2.8
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 29 2.8
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 3.7
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 29 4.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 4.9
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 6.4
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 28 6.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 6.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 6.4
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 28 6.4
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 8.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 8.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 8.5
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
G GGG PPPPPPPP
Sbjct: 56 GYGGGYGCGIPPPPPPPP 73
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -2
Query: 665 GGGGG---GGGXXXXXPPPPP 612
GGGGG GGG PPPPP
Sbjct: 50 GGGGGCGYGGGYGCGIPPPPP 70
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1
Query: 663 GGGGGGGXXXXXPPPPP 613
GGGGGGG PPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPP 615
GGGGGGGG PPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
G GGGGGG PPPPP
Sbjct: 32 GCGGGGGGGGCCAPPPPP 49
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPPP 661
GGGGG PPPPPP
Sbjct: 35 GGGGGGGCCAPPPPPP 50
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
GGGGG PPPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.69
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPP 663
GGGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPPP 661
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 657 GGGGGXXXXXPPPPP 613
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.69
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPP 663
GGGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPPP 661
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 657 GGGGGXXXXXPPPPP 613
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.5 bits (68), Expect = 0.69
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPP 663
GGGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPPP 661
GGGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 657 GGGGGXXXXXPPPPP 613
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +2
Query: 464 GGXXXXPPPPPXKKKKXXXXXXXXXXXXXXXXKXGG-XXXXXXXXXXXXXXGGGGGXXXX 640
GG PPPPP GG GGGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Query: 641 XPPPPPPP 664
PPPPPP
Sbjct: 109 CAPPPPPP 116
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
GGGGG PPPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPP 663
GGGGG PPPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 662 GGGGGGGXXXXXPPPPP 612
GGGGG G PPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 662 GGGGGGGXXXXXPPPPP 612
GGGGG G PPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPP 615
GGGGG GG PPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPP 615
GGGGG GG PPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GG GGGGG PPPP
Sbjct: 40 GGCGGGGGCGGGCAPPPP 57
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GG GGGGG PPPP
Sbjct: 97 GGCGGGGGCGGGCAPPPP 114
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
G GGGGG PPPPP
Sbjct: 41 GCGGGGGCGGGCAPPPPP 58
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
G GGGGG PPPPP
Sbjct: 98 GCGGGGGCGGGCAPPPPP 115
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPP 660
GGGGG PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 660 GGGGGGXXXXXPPPPP 613
GGGGGG PPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -2
Query: 665 GGG--GGGGGXXXXXPPPPP 612
GGG GGGGG PPPPP
Sbjct: 26 GGGYSGGGGGGGDAAPPPPP 45
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 662 GGGGGGGXXXXXPPPP 615
GGGGGGG PPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 617 GGGGXXXXXPPPPPPP 664
GGGG PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
GGGG PPPPPP P
Sbjct: 22 GGGGGCGCAPPPPPPSP 38
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPPPP 664
GGGGG PPPPP P
Sbjct: 22 GGGGGCGCAPPPPPPSP 38
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 656 GGGGGXXXXXPPPPP 612
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 270 PPPPXGXFRGXGPPPXXYSLF 332
PPPP G F+G PPP +F
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 270 PPPPXGXFRGXGPPPXXYSLF 332
PPPP G F+G PPP +F
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 270 PPPPXGXFRGXGPPPXXYSLF 332
PPPP G F+G PPP +F
Sbjct: 356 PPPPPGGFKGGPPPPPPPGMF 376
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGG PPPPPPPP
Sbjct: 292 GGGYSAPAAAPPPPPPPP 309
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPP 308
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGG GG PPP P
Sbjct: 61 GGGGGCGGGGGCAPPPAP 78
Score = 24.6 bits (51), Expect(2) = 2.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 662 GGGGGGGXXXXXPPPPP 612
GGGG PPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPP 307
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 665 GGGGGGGG 642
GGGGGGGG
Sbjct: 274 GGGGGGGG 281
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGG PPPPPPPP
Sbjct: 292 GGGYSAPAAAPPPPPPPP 309
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPP 308
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGG GG PPP P
Sbjct: 61 GGGGGCGGGGGCAPPPAP 78
Score = 24.6 bits (51), Expect(2) = 2.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 662 GGGGGGGXXXXXPPPPP 612
GGGG PPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPP 307
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 665 GGGGGGGG 642
GGGGGGGG
Sbjct: 274 GGGGGGGG 281
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 660 GGGGGGXXXXXPPPPP 613
GGGGGG PPPPP
Sbjct: 23 GGGGGGCGCGAPPPPP 38
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPP 658
GGGGG PPPPP
Sbjct: 24 GGGGGCGCGAPPPPP 38
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPP 660
GGGGG PPPPP
Sbjct: 23 GGGGGGCGCGAPPPPP 38
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +1
Query: 613 GGGGGXXXXXP---PPPPPPP 666
GGGGG P PPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +1
Query: 613 GGGGGXXXXXP---PPPPPPP 666
GGGGG P PPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GG GG GG PPPPP
Sbjct: 199 GGSGGSGGGSGRFPPPPP 216
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
G GG GGG PPPPP
Sbjct: 200 GSGGSGGGSGRFPPPPPP 217
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPPP 661
GG GG PPPPPP
Sbjct: 202 GGSGGGSGRFPPPPPP 217
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGGGG PP PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGG PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGGGG PP PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGG PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Frame = +1
Query: 613 GGGGGXXXXXP----PPPPPPP 666
GGGGG P PPPPPPP
Sbjct: 82 GGGGGGGYGRPQGYVPPPPPPP 103
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGG G PPPPP
Sbjct: 84 GGGGGYGRPQGYVPPPPP 101
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGG G PPPP
Sbjct: 83 GGGGGGYGRPQGYVPPPP 100
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPPPPP 666
GGG G PPPPPPP
Sbjct: 23 GGGKGRPPPARPPPPPPP 40
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 625 GXXXXXPPPPPPP 663
G PPPPPPP
Sbjct: 116 GDHEASPPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 646 PPPPPPP 666
PPPPPPP
Sbjct: 138 PPPPPPP 144
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.6 bits (56), Expect(2) = 2.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 610 PPPPPPPP 617
Score = 21.4 bits (43), Expect(2) = 2.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 625 GXXXXXPPPPPP 660
G PPPPPP
Sbjct: 568 GLAPARPPPPPP 579
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.6 bits (56), Expect(2) = 2.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 643 PPPPPPPP 666
PPPPPPPP
Sbjct: 436 PPPPPPPP 443
Score = 21.4 bits (43), Expect(2) = 2.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 625 GXXXXXPPPPPP 660
G PPPPPP
Sbjct: 394 GLAPARPPPPPP 405
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPPPP 666
G G PPPPPPPP
Sbjct: 525 GSGSNRRSGPPPPPPPP 541
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -2
Query: 665 GGGGGGGGXXXXXP---PPPP 612
GGGGGGGG P PPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPP 44
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 622 GGXXXXXPPPPPPPP 666
GG PPPPPPPP
Sbjct: 667 GGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 622 GGXXXXXPPPPPPPP 666
GG PPPPPPPP
Sbjct: 667 GGLGGFMPPPPPPPP 681
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 662 GGGGGGGXXXXXPPPPP 612
G GGGGG PPPPP
Sbjct: 23 GMGGGGGCGCGAPPPPP 39
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPP 658
GGGGG PPPPP
Sbjct: 25 GGGGGCGCGAPPPPP 39
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 657 GGGGGXXXXXPPPPPXXXXXXXXXXXXXXPPXF 559
GGGGG PPPPP PP +
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAY 54
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPP 660
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 613 GGGGGXXXXXPPPPP 657
GGGGG PPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 616 GGGGXXXXXPPPPPP 660
GGGG PPPPPP
Sbjct: 108 GGGGAYAQAPPPPPP 122
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 617 GGGGXXXXXPPPPPP 661
GGGG PPPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 657 GGGGGXXXXXPPPPP 613
GGGGG PPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 614 GGGGGXXXXXPPPPP 658
GGGGG PPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 660 GGGGGGXXXXXPPPP 616
GGGGGG PPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 617 GGGGXXXXXPPPPPPP 664
G GG PPPPPPP
Sbjct: 4 GRGGRYDVCPPPPPPP 19
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
G GGG GG PPPPP
Sbjct: 35 GCGGGCGGGCGCAPPPPP 52
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -2
Query: 665 GGGGGG-----GGXXXXXPPPPP 612
GGGGGG GG PPPPP
Sbjct: 20 GGGGGGEAGYSGGAGVEAPPPPP 42
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 665 GGGGGGGGXXXXXPPPPP 612
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,275,823
Number of Sequences: 27780
Number of extensions: 288626
Number of successful extensions: 8172
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3070
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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