Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_F08
(885 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 61 2e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 4e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 1e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 7e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 9e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 2e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 9e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.011
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.019
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.043
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.3 bits (147), Expect = 3e-12
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 338
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 339 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTF 506
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 507 KXGSXMXNSDEMDXVI 554
K GS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.5 bits (145), Expect = 5e-12
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 117 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 296
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 297 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQL 470
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 471 DNWPNDMQTCTFKXGSXMXNSDEMDXVI 554
+P D Q C K GS + +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.5 bits (145), Expect = 5e-12
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 117 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 296
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 297 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQL 470
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 471 DNWPNDMQTCTFKXGSXMXNSDEMDXVI 554
+P D Q C K GS + +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 486 DMQTCTFKXGSXMXNSDEMDXVI 554
D Q C K GS + +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.9 bits (141), Expect = 2e-11
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPF 120
Query: 486 DMQTCTFKXGSXMXNSDEMDXVI 554
D Q C K GS + +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPF 120
Query: 486 DMQTCTFKXGSXMXNSDEMDXVI 554
D Q C K GS + +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.7 bits (138), Expect = 4e-11
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 486 DMQTCTFKXGSXMXNSDEMDXVI 554
D Q C K GS + +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPF 120
Query: 486 DMQTCTFKXGSXMXNSDEMDXVI 554
D Q C K GS + +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 308
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 309 WLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPF 120
Query: 486 DMQTCTFKXGSXMXNSDEMDXVI 554
D Q C K GS + +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.4 bits (135), Expect = 8e-11
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 420 VSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGSXMXNSDEMD 545
V W + + ++ +P D QTC K GS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 338
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 339 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTF 506
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 507 KXGSXMXNSDEMD 545
K GS + ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 338
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 339 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXG 515
PD+VL N A A +A + + G V W + + ++ +P D QTC K G
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 516 SXMXNSDEMD 545
S + ++D
Sbjct: 173 SWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.0 bits (134), Expect = 1e-10
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +3
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 410
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 411 NGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGSXMXNSDEMD 545
G VSW + + ++ +P D Q+C K GS N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.8 bits (131), Expect = 2e-10
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +3
Query: 168 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 335
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 336 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKX 512
PD+VL N A G + +A + G V W + + + +P D QTC K
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 513 GSXMXNSDEMD 545
GS + ++D
Sbjct: 164 GSWTYDGIQID 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.6 bits (128), Expect = 6e-10
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Frame = +3
Query: 132 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 311
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 312 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPN 485
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 486 DMQTCTFKXGSXMXNSDEMD 545
D Q C K GS + ++D
Sbjct: 158 DDQRCEMKFGSWTYDGFQLD 177
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Frame = +3
Query: 168 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 344
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 345 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGS 518
+L N A + V S+ G V W+ + + ++ +P D Q C K S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 519 XMXNSDEMD 545
+ +++
Sbjct: 152 WTYDGYQLE 160
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 53.6 bits (123), Expect = 2e-09
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Frame = +3
Query: 150 PPPDSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 320
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 321 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDM 491
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 492 QTCTFKXGSXMXNSDEMDXVIDXR 563
C GS + + +E++ +D +
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKK 204
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 52.4 bits (120), Expect = 5e-09
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Frame = +3
Query: 135 RTIGTPPPDSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 308
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 309 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSMQLDN 476
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 477 WPNDMQTCTFKXGSXMXNSDEMD 545
+P D QTC K GS + +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.0 bits (119), Expect = 7e-09
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +3
Query: 207 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 377
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGS 518
R+ +G V + RL I M L+N+P D Q C + GS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Frame = +3
Query: 135 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 305
R G D +V + L +R A I + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 306 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDN 476
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 477 WPNDMQTCTFKXGSXMXNSDEM 542
+P D Q C+ + S +D++
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDL 188
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 9e-08
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 207 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 386
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 387 ALR---ARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGS 518
+ R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 2e-07
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Frame = +3
Query: 150 PPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 326
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 327 RLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTC 500
+W PD+V+ + + ++ V N+G++ + + WP D+ C
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
Query: 501 TFKXGSXMXNSDEM 542
T S S+E+
Sbjct: 174 TIHIASWSHGSNEI 187
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Frame = +3
Query: 135 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 305
R G D VV + + +R + I + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 306 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDN 476
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 477 WPNDMQTCTFKXGSXMXNSDEM 542
+P D Q C+ + S +D++
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 207 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 386
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 387 ALR---ARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGS 518
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 117 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 290
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 291 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPXSM 464
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 465 QLDNWPNDMQTCTF 506
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.1 bits (87), Expect = 5e-05
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 117 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 290
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 291 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPXSM 464
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 465 QLDNWPNDMQTCTF 506
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.1 bits (87), Expect = 5e-05
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 117 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 290
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 291 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPXSM 464
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 465 QLDNWPNDMQTCTF 506
+L+ +P D C+F
Sbjct: 189 RLNIFPFDDPLCSF 202
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.3 bits (85), Expect = 9e-05
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Frame = +3
Query: 144 GTPPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS 320
G PP + V +T++ L +++ E + + + W D RL++ G T V
Sbjct: 32 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVG 86
Query: 321 SE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLD 473
SE +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L
Sbjct: 87 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQ 143
Query: 474 NWPNDMQTC 500
+P D Q C
Sbjct: 144 YFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 258 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 410
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 411 NGSVSWIKRLDISTPXSMQLDNWPNDMQTC 500
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 258 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 410
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 411 NGSVSWIKRLDISTPXSMQLDNWPNDMQTC 500
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.006
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +3
Query: 168 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 341
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 342 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTF 506
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.011
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 377
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 378 GDYALRAR---VSNNGSVSWIKRLDISTPXSMQLDNWPNDMQTCTFKXGSXMXNSDEM 542
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S + ++
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.019
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPXSMQLDNWPNDMQ 494
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 495 TCTFKXGSXMXNSDEM 542
C + S +DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.043
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 168 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 329
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 330 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPXSMQLDNWPNDMQ 494
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 495 TC 500
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 311 PSAAAPLPCVPTQS 270
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 109 GQ*CCVFAFCRTSYSTSEEKPVTE 38
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,942
Number of Sequences: 438
Number of extensions: 3780
Number of successful extensions: 92
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -