Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_F02
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.5  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.5  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.4  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   3.4  
Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AC006761-2|AAF60547.1|  402|Caenorhabditis elegans Hypothetical ...    29   5.9  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AC024751-12|ABF71717.1|  301|Caenorhabditis elegans Collagen pro...    28   7.8  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 225  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 390  SFRP*PQNTSHS 425
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical
           protein ZK930.7 protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 530 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLT 637
           KPP+P+     T   N   + P++P  T  S  PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136


>AC006761-2|AAF60547.1|  402|Caenorhabditis elegans Hypothetical
           protein Y41G9A.5 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 640
           +   SPAI +T+T +++P+  T  TP+ +T++    + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 643
           P+P  + T+T  +NP   TPTT   TS   N ++P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPH 524


>AC024751-12|ABF71717.1|  301|Caenorhabditis elegans Collagen
           protein 47 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 639 GVRGLMEMDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETANSNARG*RGG 478
           G  GL   D   G  G    G  D V +  + G+ G   +GE  N  ++G RGG
Sbjct: 167 GPPGLAGQDGLDGAPGEPGVGGMDAVKIVSVDGKIG--RRGEAGNKGSKGSRGG 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,844,879
Number of Sequences: 27780
Number of extensions: 337359
Number of successful extensions: 1143
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)