Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_E23
         (917 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.42 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    25   0.73 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   2.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   3.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   5.1  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    23   5.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   5.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   5.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   5.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 45   KAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 134
            KA+ KV  N +I+++Y MG  DR + +  D
Sbjct: 1542 KAYQKVEENEIIFEIYKMG--DRFIGLTSD 1569


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 475 IPLPTRRVNTPAPAVRPITMYDQPIPWAPKVKY 573
           +PLP    N P P  RP   +    P+ PK+K+
Sbjct: 21  VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 221  RPLPXYYSVCISTIYPGLRRPIWRSSPMTPP 313
            RPL  +    I + Y  L R  WR     PP
Sbjct: 1328 RPLSEHIYSSIDSDYSTLERTAWRQQQPPPP 1358


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +1

Query: 121 SSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPR 270
           ++Y   C+ +  +I + E++P PV         PP P   +      IPR
Sbjct: 345 NNYNNNCKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPR 394


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 132 DYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQ 245
           D+L+N +          +P+HV  G PQ   L+  T Q
Sbjct: 87  DWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQ 124


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 146 VRQVVSYDEHESVWHSHVIQFVYQTVVPD 60
           ++ VV  DE  S W+   ++F Y   +PD
Sbjct: 623 IKSVVPSDE--SHWNDLAMEFYYNRSIPD 649


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 146 VRQVVSYDEHESVWHSHVIQFVYQTVVPD 60
           ++ VV  DE  S W+   ++F Y   +PD
Sbjct: 661 IKSVVPSDE--SHWNDLAMEFYYNRSIPD 687


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 251 ISTIYPGLRRPIWR 292
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 475 IPLPTRRVNTPAPAVRPITMYDQPIPWAPKV 567
           +PLP    N P P  RP   +    P+ PK+
Sbjct: 7   VPLP----NVPQPGRRPFPTFPGQGPFNPKI 33


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +2

Query: 152 VPISSRGNAFPAPSRHSRSPARLRPLPXYYSVCISTIYPGLRRPIWRSSPMTPP 313
           VP ++   A P        P    P+P    V  STI   +R  +  S PM PP
Sbjct: 773 VPQNTNSQAIPRIPILPMIPVYCVPVP---QVNDSTILSPVREKLSSSQPMQPP 823


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 181 PGPVTSQPESRKAPPSPRLL 240
           PG V   PE++  PPS  L+
Sbjct: 287 PGEVDLPPETQPTPPSATLV 306


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 251 ISTIYPGLRRPIWR 292
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +2

Query: 491  GASTPPPPPFAQSRCTTSPYRGPRRSN 571
            G+  PPPPP        S +   + SN
Sbjct: 1855 GSPEPPPPPPRNHDQNNSSFNDSKESN 1881


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,286
Number of Sequences: 438
Number of extensions: 7403
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)