Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_E16
(887 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 5e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 57 2e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 1e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 49 5e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 7e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 2e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 6e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.002
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.53
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.92
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 8.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 8.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.5 bits (145), Expect = 5e-12
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRESPPDSK----VVVNLTLHLRHA---NIRESEST 254
I SA C + D LL+ Y+R P S VVV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 428
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 429 VSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
+ G V W + + + + D QTC FGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.4 bits (135), Expect = 8e-11
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRESPPDSKVVVNLTLHLR-------HANIRESESTVRILAD 272
C + D LL+ Y++ P V LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
V W + + ++ + D QTC FGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.0 bits (134), Expect = 1e-10
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Frame = +3
Query: 192 KVVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 365
KV VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCTF 533
PD+VL N A G+Y +R + + NG V W+ + ++ + + D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 XFGSRMXNSDXMDXVI 581
FGS N D + +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 57.2 bits (132), Expect = 2e-10
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKVVVNLTLHLRHAN-IRESESTVRILADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 458
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 459 KRLDISTPISMQLDXWSNDMQTCTFXFGS 545
RL I M L+ + D Q C FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 76 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V++NGS ++ + + + + D Q C
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 194 DMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.2 bits (132), Expect = 2e-10
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 76 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V++NGS ++ + + + + D Q C
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 194 DMKFGSWTYDGNQVDLVL 211
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKVVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 470
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 471 ISTPISMQLDXWSNDMQTCTFXFGSRMXNSDXMD 572
+ + ++ + D Q+C FGS N +D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V++NGS ++ + + + + D Q C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 126 DMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKVVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 479
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 480 PISMQLDXWSNDMQTCTFXFGS 545
+ ++ + D QTC FGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V+++GS ++ + M + + D Q C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 126 DMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V+++GS ++ + M + + D Q C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 126 DMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 6e-10
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Frame = +3
Query: 84 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKVVVNLTLHLRH---ANIRE 242
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 243 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 419
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 420 ----RARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
+A + + G V W + + ++ + D QTC FGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V+++GS ++ + + + + D Q C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 126 DMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V+++GS ++ + + + + D Q C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 126 DMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 ESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 350
ES P +V +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 351 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+LW+PD+++ N+A G Y V+++GS ++ + + + + D Q C
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
Query: 528 TFXFGSRMXNSDXMDXVI 581
FGS + + +D V+
Sbjct: 126 DMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.4 bits (125), Expect = 1e-09
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKVVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 470
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 471 ISTPISMQLDXWSNDMQTCTFXFGS 545
+ S+ ++ + D+QTC GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.4 bits (120), Expect = 5e-09
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Frame = +3
Query: 75 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRESPP---DSKVVV---NLTLHLRHA 230
R+ L AIA AA + +++ LL TY+ P +S+ +V LTL ++
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTL-MQII 61
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 404
++ E + L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 62 DVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFD 121
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
G Y V NNG+ ++ + + + + D Q C FGS
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 50.8 bits (116), Expect = 2e-08
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRESPPDS--KVVVNLTLHL--RHANIRESESTVRILADLQMN 284
++ T+L + L YD P S ++ N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 285 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 452
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 453 WIKRLDISTPISMQLDXWSNDMQTCTFXFGSRMXNSDXMDXVIDXK 590
+ + + W D C FGS + + + ++ +D K
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 49.2 bits (112), Expect = 5e-08
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRESPPDSK--VVVNLTLHLRHANIRESESTVRILADLQ 278
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 449
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 450 SWIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
+ + W D+ CT S
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIAS 179
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 195 VVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
VV L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
+L N A + VS+ G V W+ + + ++ + D Q C + S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.6 bits (108), Expect = 2e-07
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPD----SKVVVNLTLHLRHAN-IRESESTVRILADLQMNWID 293
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 465 LDISTPISMQLDXWSNDMQTCTFXFGS 545
L I M+L + D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 12/155 (7%)
Frame = +3
Query: 141 MIDSLLATYDR------ESPPDSKVVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 299
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISTPISMQLDXWSNDMQTCTFXFGSRMXNSDXM 569
+ ++ M L + D Q C+ S +D +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKVVVNLTLH-LRHANIRESESTVRILADLQMNW 287
N ++S ++DS +YD+ P+ V V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSVSWIKRLDISTPISMQLDXWSNDMQTC 527
GS++ RL I+ M L + D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.3 bits (95), Expect = 6e-06
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKVVVNLTLH-LRHANIRESESTVRILADLQMNW 287
N ++S ++DS +YD+ P+ V V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSVSWIKRLDISTPISMQLDXWSNDMQTC 527
GS++ RL I+ M L + D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 12/155 (7%)
Frame = +3
Query: 141 MIDSLLATYDR------ESPPDSKVVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 299
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISTPISMQLDXWSNDMQTCTFXFGSRMXNSDXM 569
+ ++ M L + D Q C+ S +D +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 413
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCT 530
R R+S +GSV++ R + M L + D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.002
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSVSWIKRLDISTPISMQLDXWSNDMQTC 527
+GS++ RL I+ M L + D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.7 bits (71), Expect = 0.005
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLAT--YDRE--SPPDSKVVVNLT-LHLRHANIRESESTVRILADLQM 281
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 282 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 452
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 453 WIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
++ R + +L+ + D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.005
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLAT--YDRE--SPPDSKVVVNLT-LHLRHANIRESESTVRILADLQM 281
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 282 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 452
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 453 WIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
++ R + +L+ + D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.7 bits (71), Expect = 0.005
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLAT--YDRE--SPPDSKVVVNLT-LHLRHANIRESESTVRILADLQM 281
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 282 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 452
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 453 WIKRLDISTPISMQLDXWSNDMQTCTFXFGS 545
++ R + +L+ + D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.9 bits (59), Expect = 0.13
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +3
Query: 195 VVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 368
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 369 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWSNDMQTCTFXFG 542
D ++ R+ NG+V+++ R + +L+ + D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 543 S 545
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.8 bits (54), Expect = 0.53
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +3
Query: 195 VVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 356
V+V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWSNDMQ 521
LW+PD LNA + AL + S+ N +V + R+ M+ + D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 522 TC 527
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.92
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWSNDMQ 521
+ +WRPD NA + T + + + ++ ++ +L + +M + +D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TCTFXFGSRMXNSDXM 569
C S +D M
Sbjct: 176 ECKLQMESLSHTTDEM 191
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 766 PPWXPVLFGXRGVPWPPRPL 825
P + P + G+P+P RP+
Sbjct: 293 PGYYPTMTYSNGLPFPQRPI 312
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 766 PPWXPVLFGXRGVPWPPRPL 825
P + P + G+P+P RP+
Sbjct: 293 PGYYPTMTYSNGLPFPQRPI 312
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 338 PSAAAPFPCVPTQS 297
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 137 GQ*CCVFAFCRTSYSTSEEKPVTR 66
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,367
Number of Sequences: 438
Number of extensions: 4019
Number of successful extensions: 87
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -