Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_E09
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 64 1e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 64 1e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 60 3e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 55 7e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 2e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 52 9e-09
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 49 6e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.010
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.010
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.042
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.90
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 8.4
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 64.5 bits (150), Expect = 1e-12
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 285
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 286 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 456
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 457 KRLDISTPISMQLDNWPNDMQTCTFXFGS 543
RL I M L+N+P D Q C FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 64.5 bits (150), Expect = 1e-12
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Frame = +1
Query: 94 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 252
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 253 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 426
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 427 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
+ G V W + + + +P D QTC FGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 62.1 bits (144), Expect = 6e-12
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Frame = +1
Query: 190 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 363
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 364 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 531
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 532 XFGSRMHNSDE 564
FGS N D+
Sbjct: 168 KFGSWTFNGDQ 178
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 60.5 bits (140), Expect = 2e-11
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = +1
Query: 112 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 270
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 445 VSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
V W + + ++ +P D QTC FGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 59.7 bits (138), Expect = 3e-11
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Frame = +1
Query: 112 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 276
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 277 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 447
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 448 SWIKRLDISTPISMQLDN--WPNDMQTCTFXFGSRMHNSDE 564
+ TP+ + D+ WP D+ CT S H S+E
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNE 186
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.8 bits (136), Expect = 6e-11
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 297
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 298 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 462
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 463 LDISTPISMQLDNWPNDMQTCTFXFGSRMHN 555
+ + ++ +P D Q+C FGS +N
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 58.4 bits (135), Expect = 8e-11
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 240
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 241 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 417
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 418 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
+A + + G V W + + ++ +P D QTC FGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.0 bits (134), Expect = 1e-10
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 282
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 283 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 450
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 451 WIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
+ + + +WP D C FGS +H+ +E
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEE 196
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 477
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 478 PISMQLDNWPNDMQTCTFXFGS 543
+ ++ +P D QTC FGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V++NGS ++ + + + +P D Q C FGS ++ ++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V++NGS ++ + + + +P D Q C FGS ++ ++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V++NGS ++ + + + +P D Q C FGS ++ ++
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V+++GS ++ + M + +P D Q C FGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V+++GS ++ + M + +P D Q C FGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQ 138
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 468
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 469 ISTPISMQLDNWPNDMQTCTFXFGS 543
+ S+ ++ +P D+QTC GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V+++GS ++ + + + +P D Q C FGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 55.2 bits (127), Expect = 7e-10
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Frame = +1
Query: 127 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 291
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 292 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 462
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 463 LDISTPISMQLDNWPNDMQTCTFXFGS 543
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V+++GS ++ + + + +P D Q C FGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
G Y V+++GS ++ + + + +P D Q C FGS ++ ++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.6 bits (123), Expect = 2e-09
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 255
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 256 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 429
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 430 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
NNG+ ++ + + + +P D Q C FGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +1
Query: 193 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 369
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 370 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
+L N A + VS+ G V W+ + + ++ +P D Q C + S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 51.6 bits (118), Expect = 9e-09
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 222
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 223 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
+ + R+ NGSV + R+ ++ M L +P D Q C+ S +D+
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -1
Query: 626 HIPRSXLETYGIFFCQSRXPFSSLLCI 546
H+PR LE + +C S+ C+
Sbjct: 205 HLPRFTLEKFFTDYCNSKTNTGEYSCL 231
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 48.8 bits (111), Expect = 6e-08
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 222
++LL FLL + + + ++D++L YD P D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 223 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
+ I + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
+ + R+ NGSV + R+ ++ M L +P D Q C+ S +D+
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -1
Query: 626 HIPRSXLETYGIFFCQSRXPFSSLLCI 546
H+PR LE + +C S+ C+
Sbjct: 205 HLPRFTLEKFFTDYCNSKTNTGEYSCL 231
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.8 bits (106), Expect = 3e-07
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSWIKRLDISTPISMQLDNWPNDMQTC 525
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSWIKRLDISTPISMQLDNWPNDMQTC 525
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +1
Query: 232 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 411
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 412 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 528
R R+S +GSV++ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 543
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +1
Query: 283 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 435
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 436 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 525
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.001
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 402
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 403 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 564
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + +
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQD 159
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 193 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 366
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 367 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFG 540
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 541 S 543
S
Sbjct: 257 S 257
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.010
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 355 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 525
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 526 TFXFGSRMHN 555
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.010
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 519
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 520 TCTFXFGSRMHNSDE 564
C S H +DE
Sbjct: 176 ECKLQMESLSHTTDE 190
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.042
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +1
Query: 193 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 354
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 355 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 519
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 520 TC 525
C
Sbjct: 129 IC 130
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.90
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 58 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 162
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 336 PSAAAPLPCVPTQS 295
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/32 (21%), Positives = 15/32 (46%)
Frame = -3
Query: 654 GXAPHWTXXSHPTVXTRNIRYILLSITXSIFV 559
G HW + RN+ +L+++ + F+
Sbjct: 265 GGTNHWDSGRRKSAAQRNVIRMLVAVVVAFFI 296
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,933
Number of Sequences: 438
Number of extensions: 4758
Number of successful extensions: 92
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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