Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_D24
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3687|AAF47062.2|  175|Drosophila melanogaster CG13561-P...    31   2.8  
AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p pro...    30   4.9  
AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P...    30   4.9  
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P...    30   4.9  
AE014298-1193|AAF46385.1|  679|Drosophila melanogaster CG33181-P...    30   4.9  

>AE013599-3687|AAF47062.2|  175|Drosophila melanogaster CG13561-PA
           protein.
          Length = 175

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 243 DHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPLRV 362
           +HPF   +L S+ +R  + +C   I  E +L H R P++V
Sbjct: 101 NHPFINIILSSFGNRTNVNKC--PIPPEIVLEHFRFPVKV 138


>AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p
           protein.
          Length = 857

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +3

Query: 510 RSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGVKPPL 680
           RS P+ +S     +  H P H +   H P TP   S   + L A L     G  PPL
Sbjct: 86  RSPPHGNSKSHPHAHPHHPPHSL--HHPPLTPQQNSDLFDSLAAELRAKLNGNGPPL 140


>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
           isoform B protein.
          Length = 1006

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +3

Query: 510 RSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGVKPPL 680
           RS P+ +S     +  H P H +   H P TP   S   + L A L     G  PPL
Sbjct: 235 RSPPHGNSKSHPHAHPHHPPHSL--HHPPLTPQQNSDLFDSLAAELRAKLNGNGPPL 289


>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
           isoform A protein.
          Length = 1006

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +3

Query: 510 RSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLNAVLXGVRAGVKPPL 680
           RS P+ +S     +  H P H +   H P TP   S   + L A L     G  PPL
Sbjct: 235 RSPPHGNSKSHPHAHPHHPPHSL--HHPPLTPQQNSDLFDSLAAELRAKLNGNGPPL 289


>AE014298-1193|AAF46385.1|  679|Drosophila melanogaster CG33181-PA
           protein.
          Length = 679

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +1

Query: 439 TTADVTVEGVNVLATPSSSRFTIGGLALMHRATLPCDL----GYINPIIKSPNSIHQPPQ 606
           T    T  G    +TP+ S  T     L HR T P ++    GY+NP   S N+   PP 
Sbjct: 22  TQTPATATGTTTPSTPTPSTRTTQPNELKHRLT-PLNVRRLSGYVNPQAISDNAGDDPPP 80

Query: 607 T 609
           T
Sbjct: 81  T 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,712,800
Number of Sequences: 53049
Number of extensions: 713923
Number of successful extensions: 2385
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2383
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)