Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_D09
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 47 2e-05
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 43 3e-04
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 39 0.005
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.021
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 36 0.028
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 35 0.065
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 32 0.61
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 0.81
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 0.81
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 31 1.4
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 31 1.4
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 31 1.4
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 30 1.9
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 29 3.3
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 29 3.3
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 29 4.3
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 28 7.5
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 28 7.5
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +3
Query: 429 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 608
V D+L P + +V+G++ ++ FLGCCGAIRE++C+ V++A
Sbjct: 41 VLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAV 100
Query: 609 XXXFTYGESIKESIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYGQF- 785
+ +S + I + + + ++ E+A + + + FECCG T + ++ F
Sbjct: 101 IIGYALHDSFRLGIGNQLQTGMVRYHESRGVESA---WDKTHQLFECCGVTNSSDWLTFT 157
Query: 786 TLPES 800
T+P+S
Sbjct: 158 TIPDS 162
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/106 (24%), Positives = 41/106 (38%)
Frame = +3
Query: 468 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 647
+I IV+GAVM V+A LGCCG S ++ Y+ + +
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174
Query: 648 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYGQF 785
+ D + + + + LQ F CCGN G ++ F
Sbjct: 175 LSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDFRVF 218
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +3
Query: 468 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 647
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 648 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNT 761
I + KK S A +Q F+CCG T
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT 159
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/96 (21%), Positives = 38/96 (39%)
Frame = +3
Query: 468 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 647
W + GA++ ++ + GC GA + + C + + F E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 648 IMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG 755
+ + + R + A + F +Q +FECCG
Sbjct: 118 VESSMYDTIRNRYSSET--AFKDAFDTVQEKFECCG 151
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +3
Query: 453 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGE 632
L ++ +V G ++ FLG CGA+ S +++ + Y +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 633 ---SIKESIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINY 776
S+KE++ + V + + + +LQ +CCG+ G +Y
Sbjct: 83 KVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +3
Query: 468 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 647
W ++VG + F+I F GC G++RE+ + Y+ + + +
Sbjct: 86 WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNY 145
Query: 648 IMDGVG-VLFKKRSDANAXEAAEAVFSELQRQFECCGNTGAINYGQFT 788
I + + V+ R D + + + +Q + CCG GA ++ + T
Sbjct: 146 IRNLLNDVVVGYRDDPD----LQLLIDSMQETWMCCGINGADDWDRNT 189
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 468 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 566
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 36.3 bits (80), Expect = 0.028
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Frame = -1
Query: 664 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 491
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 490 APTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVPHPM 311
PTTMK T + T TP S P + TT ST T P M
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 269
Score = 29.9 bits (64), Expect = 2.5
Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Frame = -1
Query: 676 LNSTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 500
+ STPT P+ ++ +P T T TM T TTM+ + P K+ T
Sbjct: 243 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 297
Query: 499 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVP 320
T PTTMK T + T TP S P + TT ST T P
Sbjct: 298 TPTTPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354
Query: 319 HPM 311
M
Sbjct: 355 TTM 357
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.1 bits (77), Expect = 0.065
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 468 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 566
++ V G ++ V+AFLGCCGA +E ++ Y+
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 505 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRS-ATTRLK 353
I N+T P+ +IH + +W+ + T Q +N P+P S R+ A+T+ K
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARAVASTQTK 402
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -1
Query: 664 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 485
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 484 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 365
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -1
Query: 664 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 485
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 484 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 365
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -1
Query: 664 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 485
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 484 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 365
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -1
Query: 664 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 485
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 484 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSAT 365
TT+ T ++S+T + TP+ SS P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 743 ELSLQFREDSLGGLVCVSVGSLFE*HADAIHNALLDALAVGEEEDADHHLHN-DDHQQED 567
+L+L +E+SL ++ SV + E H + LD + DHH+HN ++H+ +
Sbjct: 53 DLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQSGHDHHIHNNEEHKHHN 109
Query: 566 CVRDDH 549
DH
Sbjct: 110 MRSHDH 115
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -1
Query: 562 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 392
YVT+ +R A K A + + T ++ PT+R S LTM Q R A+
Sbjct: 180 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 237
Query: 391 TSSRPRSATTRLKKNSTYFTKLVPHPMLRALFF 293
+++RP +AT N + P PM R L F
Sbjct: 238 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 269
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -1
Query: 562 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 392
YVT+ +R A K A + + T ++ PT+R S LTM Q R A+
Sbjct: 170 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 227
Query: 391 TSSRPRSATTRLKKNSTYFTKLVPHPMLRALFF 293
+++RP +AT N + P PM R L F
Sbjct: 228 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 259
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -1
Query: 562 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 392
YVT+ +R A K A + + T ++ PT+R S LTM Q R A+
Sbjct: 170 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 227
Query: 391 TSSRPRSATTRLKKNSTYFTKLVPHPMLRALFF 293
+++RP +AT N + P PM R L F
Sbjct: 228 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 259
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 617 EEDADHHLHNDDHQQEDCVRDDH 549
EE DHH H+ DH E +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 717 VFSELQRQFECCGNTGAINYGQF 785
+ +QR++ CCG GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 491 CNVRDRVLGMLWSDTRESLHGRHVR--NLLAGDHHCASGDQRPPLHLRREHQGEHYGWRR 664
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 665 RAIQK 679
+A++K
Sbjct: 278 KALKK 282
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 491 CNVRDRVLGMLWSDTRESLHGRHVR--NLLAGDHHCASGDQRPPLHLRREHQGEHYGWRR 664
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 665 RAIQK 679
+A++K
Sbjct: 278 KALKK 282
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 4.3
Identities = 27/119 (22%), Positives = 40/119 (33%)
Frame = -1
Query: 670 STPTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNIT 491
+T TP+ + +P T TT T T+ + T + + P T T
Sbjct: 74 TTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPT---TTTT 130
Query: 490 APTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKNSTYFTKLVPHP 314
PTT T + T TP T++ P + TT +T T P
Sbjct: 131 TPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 189
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 429 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 563
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPY 103
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 611 DADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEH 495
D DHH H+D+H ED +H + A D +H
Sbjct: 10 DGDHHDHHDEHHHED--HHEHGADGEHVHHAGDHCDTQH 46
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +3
Query: 420 WTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXX 587
+ +KD + L + P I I + G + V++F G GA+R++ ++ +A
Sbjct: 54 YLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSY 113
Query: 588 XXXXXXXXXXFT-YGESIKESIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG 755
FT + E + +L+ ++ AE + LQ ECCG
Sbjct: 114 ILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDALQENLECCG 169
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +3
Query: 420 WTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXX 587
+ +KD + L + P I I + G + V++F G GA+R++ ++ +A
Sbjct: 78 YLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSY 137
Query: 588 XXXXXXXXXXFT-YGESIKESIMDGVGVLFKKRSDANAXEAAEAVFSELQRQFECCG 755
FT + E + +L+ ++ AE + LQ ECCG
Sbjct: 138 ILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDALQENLECCG 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,133,054
Number of Sequences: 27780
Number of extensions: 351648
Number of successful extensions: 1392
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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