Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_D05
(884 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 5e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 5e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 59 6e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 8e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 7e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 4e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 5e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 2e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 38 1e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 32 0.008
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.025
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.043
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 62.5 bits (145), Expect = 5e-12
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Frame = +2
Query: 161 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 334
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 335 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTF 502
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 503 XXGSRMXNSDEMDXVI--DPTXYSMFD---SGAWDV 595
GS N D++ + + + D SG WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.5 bits (145), Expect = 5e-12
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Frame = +2
Query: 65 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 223
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 224 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 397
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 398 VSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMD 541
+ G V W + + + +P D QTC GS + ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.5 bits (140), Expect = 2e-11
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V++NGS ++ + + + +P D Q C GS + +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.5 bits (140), Expect = 2e-11
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V++NGS ++ + + + +P D Q C GS + +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V++NGS ++ + + + +P D Q C GS + +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V+++GS ++ + M + +P D Q C GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.3 bits (137), Expect = 5e-11
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Frame = +2
Query: 83 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 241
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 242 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 415
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 416 VSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMD 541
V W + + ++ +P D QTC GS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V+++GS ++ + M + +P D Q C GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 256
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 257 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 427
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 428 KRLDISTPISMQLDXWPNDXQTCTFXXGS 514
RL I M L+ +P D Q C GS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.4 bits (135), Expect = 8e-11
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Frame = +2
Query: 110 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 268
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 269 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 433
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 434 LDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMD 541
+ + ++ +P D Q+C GS N ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V+++GS ++ + + + +P D Q C GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V+++GS ++ + + + +P D Q C GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVI 550
G Y V+++GS ++ + + + +P D Q C GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.4 bits (130), Expect = 3e-10
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Frame = +2
Query: 86 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 253
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 254 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 421
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 422 WIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVIDPTXYSM---FDSGAWD 592
+ + + WP D C GS + + +E++ +D + M ++ WD
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWD 218
Query: 593 VTALSS 610
+ +
Sbjct: 219 FKVIKA 224
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 274
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 275 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 448
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 449 PISMQLDXWPNDXQTCTFXXGSRMXNSDEMD 541
+ ++ +P D QTC GS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.0 bits (129), Expect = 4e-10
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Frame = +2
Query: 83 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 247
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 248 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 418
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 419 SWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEM 538
+ + WP D CT S S+E+
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 274
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 275 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 439
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 440 ISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMD 541
+ S+ ++ +P D QTC GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 6e-10
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Frame = +2
Query: 56 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 214
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 215 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 388
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 389 ---RARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGS 514
+A + + G V W + + ++ +P D QTC GS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.6 bits (128), Expect = 6e-10
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Frame = +2
Query: 62 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 226
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 227 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 400
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 401 SNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEMDXVIDP----TXYS 568
NNG+ ++ + + + +P D Q C GS + ++D + S
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISS 190
Query: 569 MFDSGAWDV 595
+G WD+
Sbjct: 191 FITNGEWDL 199
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +2
Query: 164 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 340
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 341 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGS 514
+L N A + VS+ G V W+ + + ++ +P D Q C S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.0 bits (119), Expect = 7e-09
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 98 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 262
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 263 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 434 LDISTPISMQLDXWPNDXQTCTFXXGS 514
L I M+L +P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.6 bits (113), Expect = 4e-08
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 268
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 269 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 434 LDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEM 538
+ ++ M L +P D Q C+ S +D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.2 bits (107), Expect = 2e-07
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 256
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 257 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 409
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 410 GSVSWIKRLDISTPISMQLDXWPNDXQTC 496
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.8 bits (106), Expect = 3e-07
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 268
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 269 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 434 LDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEM 538
+ ++ M L +P D Q C+ S +D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 5e-07
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 256
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 257 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 409
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 410 GSVSWIKRLDISTPISMQLDXWPNDXQTC 496
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 203 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 382
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 383 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCT 499
R R+S +GSV++ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 37.9 bits (84), Expect = 1e-04
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 86 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 250
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 251 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 421
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 422 WIKRLDISTPISMQLDXWPNDXQTCTF 502
++ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 37.9 bits (84), Expect = 1e-04
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 86 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 250
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 251 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 421
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 422 WIKRLDISTPISMQLDXWPNDXQTCTF 502
++ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 37.9 bits (84), Expect = 1e-04
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 86 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 250
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 251 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 421
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 422 WIKRLDISTPISMQLDXWPNDXQTCTF 502
++ R + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 254 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 406
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 407 NGSVSWIKRLDISTPISMQLDXWPNDXQTC 496
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.002
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +2
Query: 164 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 337
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 338 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTF 502
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.9 bits (69), Expect = 0.008
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 320 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDXQ 490
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 491 TCTFXXGSRMXNSDEMDXVIDP 556
C S +DEM DP
Sbjct: 176 ECKLQMESLSHTTDEMIFQWDP 197
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 30.3 bits (65), Expect = 0.025
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 373
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 374 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDXQTCTFXXGSRMXNSDEM 538
+ ++ + ++ ++ ++ +L + +M+ + +P+D Q C+ S + ++
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.043
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +2
Query: 164 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 325
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 326 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPNDXQ 490
LW+PD LNA + AL + S+ N +V + R+ M+ +P D Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 491 TC 496
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 307 PSAAAPLPCVPTQS 266
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,251
Number of Sequences: 438
Number of extensions: 4019
Number of successful extensions: 87
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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