Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_FL5_D02
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S47833-1|AAA11725.1|  760|Homo sapiens AMP deaminase isoform L p...    30   9.5  

>S47833-1|AAA11725.1|  760|Homo sapiens AMP deaminase isoform L
           protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
 Frame = -2

Query: 805 GXPXSKDQXQRRYERLAATSQYPWGTFXAPLXKTLYXKGSIGRAFAVPMRTEHLDQASFC 626
           G    +D  +R ++R+  + +   G    P    L    S+ RA  +  +   L   SFC
Sbjct: 88  GSLRERDVLEREFQRVTISGEEKCGV---PFTDLLDAAKSVVRALFIREKYMALSLQSFC 144

Query: 625 PFAPREVSVLAELALGHLRYSL-TDVPPQSNSP 530
           P   R +  LAE  L    Y    D P  +++P
Sbjct: 145 PTTRRYLQQLAEKPLETRTYEQGPDTPVSADAP 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,267,700
Number of Sequences: 237096
Number of extensions: 2735556
Number of successful extensions: 5997
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5994
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)