Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_D01
(867 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 6e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 7e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 54 1e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 4e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 49 5e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 43 4e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.52
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 5e-11
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V++NGS + + + + +P D C KFGS + + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 585 XE 590
E
Sbjct: 213 SE 214
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 5e-11
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V++NGS + + + + +P D C KFGS + + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 585 XE 590
E
Sbjct: 213 SE 214
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V++NGS + + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 585 XE 590
E
Sbjct: 145 SE 146
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V+++GS + + M + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 585 XE 590
E
Sbjct: 145 SE 146
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V+++GS + + M + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 585 XE 590
E
Sbjct: 145 SE 146
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V+++GS + + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 585 XE 590
E
Sbjct: 145 SE 146
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V+++GS + + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 585 XE 590
E
Sbjct: 145 SE 146
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
G Y V+++GS + + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 585 XE 590
E
Sbjct: 145 SE 146
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 55.6 bits (128), Expect = 6e-10
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 VRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 428
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 429 VSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMD 572
+ G + + + +P D TC KFGS + +D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 55.2 bits (127), Expect = 7e-10
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSXS*I 458
+D+RL + G+ + + R+W+PD N + T R+ +G
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 459 KRLDXSTPISMQLDNWPNDMXTCTXKFGS 545
RL M L+N+P D C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 54.4 bits (125), Expect = 1e-09
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSX 449
+ W L W + E+ ++ V S +W PD+V+ + + ++ V N+G+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 450 S*IKRLDXSTPISMQLDN--WPNDMXTCTXKFGSTMHXSD 563
+ TP+ + D+ WP D+ CT S H S+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSN 185
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 54.4 bits (125), Expect = 1e-09
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 8/164 (4%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 284
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 285 WIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSXS 452
W D L W ++ G + V S+ +W PD+ + N+ T G V ++GS S
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 453 *IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVID 584
+ + + +WP D C FGS +H + ++ +D
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLD 202
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.8 bits (121), Expect = 4e-09
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 257
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 258 RIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 431
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 432 SNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFVIDXE 590
NNG+ + + + + +P D C KFGS + +D + E
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDE 183
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.0 bits (119), Expect = 7e-09
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 272
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 XS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMD 572
+ + ++ +P D TC KFGS + +D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.8 bits (116), Expect = 2e-08
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTX 533
PD+VL N A G+Y +R + + NG + + ++ + +P D TC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 KFGSTMHXSDXMDFVI 581
KFGS D + +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.0 bits (114), Expect = 3e-08
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLX 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSXS*IKRLDXST 479
W E+G L V S+ +WRPD+VL NA A +A + + G +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 480 PISMQLDNWPNDMXTCTXKFGSTMHXSDXMD 572
+ ++ +P D TC KFGS + +D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.2 bits (112), Expect = 5e-08
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Frame = +3
Query: 87 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 245
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 246 ESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 419
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 420 ---RARVSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMD 572
+A + + G + + ++ +P D TC KFGS + +D
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.2 bits (112), Expect = 5e-08
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 299
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 300 LXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSXS*IKR 464
L WN E+G L V SE +W PD+VL N A G+Y + +A + G S
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 465 LDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMD 572
+ + ++ +P D +C KFGS + +D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 47.6 bits (108), Expect = 1e-07
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLX 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSXS*IKRLD 470
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 471 XSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMD 572
+ S+ ++ +P D+ TC K GS + +D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 43.6 bits (98), Expect = 2e-06
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 8/147 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 293
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSXS*IKR 464
RL + S + ER+WRPD N + + R+S +G R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 465 LDXSTPISMQLDNWPNDMXTCTXKFGS 545
L M+L N+P D +C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSXS*IKRLDXSTPISMQLDNWPNDMXTCTXKFGS 545
+L N A + VS+ G + + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSXS*IKR 464
L +N G T L + R+W PD+ N + + R+ NGS R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDXSTPISMQLDNWPNDMXTCTXKFGSTMHXSDXMDFV 578
+ + M L +P D C+ + S +D + F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.52
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSXS*IKRLDXSTPISMQLDNWPNDMX 521
+ +WRPD NA + T + + + + + +L +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TCTXKFGSTMHXSDXMDFVIDXE 590
C + S H +D M F D +
Sbjct: 176 ECKLQMESLSHTTDEMIFQWDPD 198
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.4
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 195 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLX-----WNAGEWGCSTWLVSSER 356
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNA 389
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 338 PSAAAPLPCVPXQS 297
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,683
Number of Sequences: 438
Number of extensions: 4754
Number of successful extensions: 57
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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