Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_C02
(923 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 118 9e-27
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 118 9e-27
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 89 1e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 85 1e-16
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 83 7e-16
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 79 1e-14
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 79 1e-14
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 78 2e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 78 2e-14
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 67 3e-11
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 62 1e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 62 1e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 60 4e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 60 6e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 48 1e-05
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 43 7e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 37 0.045
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC... 33 0.55
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 33 0.55
AE014298-836|AAF46116.2| 893|Drosophila melanogaster CG5921-PA,... 31 2.9
AE014298-835|AAN09159.1| 944|Drosophila melanogaster CG5921-PB,... 31 2.9
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 30 3.9
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 30 3.9
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 30 3.9
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 6.8
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 6.8
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 29 6.8
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 29 6.8
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 29 6.8
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 29 6.8
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 6.8
DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12 pro... 29 9.0
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro... 29 9.0
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ... 29 9.0
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 118 bits (285), Expect = 9e-27
Identities = 60/179 (33%), Positives = 102/179 (56%)
Frame = +1
Query: 118 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 297
LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 298 TKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 477
K+ A+ F + R P +P R R + PI WV ++YLG+ D+ +T
Sbjct: 736 NKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLT 782
Query: 478 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAART 654
F+ HI + I+ LYP++ +SKLS+ NK+ ++KT P++ Y S V+ A+T
Sbjct: 783 FKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQT 841
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 118 bits (285), Expect = 9e-27
Identities = 60/179 (33%), Positives = 102/179 (56%)
Frame = +1
Query: 118 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 297
LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 298 TKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 477
K+ A+ F + R P +P R R + PI WV ++YLG+ D+ +T
Sbjct: 684 NKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLT 730
Query: 478 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAART 654
F+ HI + I+ LYP++ +SKLS+ NK+ ++KT P++ Y S V+ A+T
Sbjct: 731 FKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQT 789
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 88.6 bits (210), Expect = 1e-17
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Frame = +1
Query: 115 LLFSLYINDIPRSP-----ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKW 279
LL+ LY +D+P+ ++ LA FADD + Y R +Q +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 280 RIDINPTKSAAVLF--KRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 453
I IN +KS V F KR PP P+ + P+P + KYLG
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPP-------------------PVYIEEVPVPQPNAAKYLG 749
Query: 454 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVV 633
V LDR +TF H+ +R R + + Y +L SRSKLSL NK+T+YK + P Y +
Sbjct: 750 VLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQI 809
Query: 634 FAHA 645
+ A
Sbjct: 810 WGLA 813
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 85.4 bits (202), Expect = 1e-16
Identities = 55/179 (30%), Positives = 87/179 (48%)
Frame = +1
Query: 118 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 297
L+ +Y DIP + ++ FADDTAI R +L + + + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 298 TKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 477
K V F R P P+ L P+P +V YLGV LDR +T
Sbjct: 708 QKCKHVTFTLNR-----QDCP------------PLLLNSIPLPKADEVTYLGVHLDRRLT 750
Query: 478 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAART 654
+R HI+ + + L+ ++ S S LSL +KV LY + ++P+ TY S ++ +A+ +
Sbjct: 751 WRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNS 809
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 82.6 bits (195), Expect = 7e-16
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Frame = +1
Query: 115 LLFSLYINDIPRSPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
LL+S++ D+P H LA +ADD A+ YS + R LQ + TL W
Sbjct: 650 LLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWC 709
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
++W + +NP K+ P + + + +PI L G + S+ KYL
Sbjct: 710 KRWILKVNPQKTIN---------------PCFTLKTLSPVTAPIELEGVILDQPSQAKYL 754
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASV 630
G+TLD+ +TF PH+K R + +L +L +S ++LR K +Y C+ P+ Y
Sbjct: 755 GITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQ 814
Query: 631 VFAHAARTT*NPFRLFNH 684
++ AA++ N ++ +
Sbjct: 815 IWGIAAKSNYNRIQVLQN 832
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 78.6 bits (185), Expect = 1e-14
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 8/194 (4%)
Frame = +1
Query: 118 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 273
L+S++ +D+P +P T +A +ADDTA+ + + LQ + QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 274 KWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 453
W + IN K A V F N T S P ++L G+ I KYLG
Sbjct: 712 NWNVRINAEKCANVTF-----ANRTGSCP------------GVSLNGRLIRHHQAYKYLG 754
Query: 454 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVV 633
+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK+ + P + Y V
Sbjct: 755 ITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQV 814
Query: 634 FAHAARTT*NPFRL 675
+ AA++ N R+
Sbjct: 815 YGIAAKSHLNKIRI 828
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 78.6 bits (185), Expect = 1e-14
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 8/194 (4%)
Frame = +1
Query: 118 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 273
L+S++ +D+P +P T +A +ADDTA+ + + LQ + QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 274 KWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 453
W + IN K A V F N T S P ++L G+ I KYLG
Sbjct: 514 NWNVRINAEKCANVTF-----ANRTGSCP------------GVSLNGRLIRHHQAYKYLG 556
Query: 454 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVV 633
+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK+ + P + Y V
Sbjct: 557 ITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQV 616
Query: 634 FAHAARTT*NPFRL 675
+ AA++ N R+
Sbjct: 617 YGIAAKSHLNKIRI 630
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 77.8 bits (183), Expect = 2e-14
Identities = 54/180 (30%), Positives = 81/180 (45%)
Frame = +1
Query: 115 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 294
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 295 PTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM 474
K V F N P+ L IP +V YLGV LDR +
Sbjct: 705 VQKCKQVTFT-----------------LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRL 747
Query: 475 TFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAART 654
T+R HI+ L+ ++ +RS LSL K LY + ++P+ TY S ++ +A+R+
Sbjct: 748 TWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRS 807
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 77.8 bits (183), Expect = 2e-14
Identities = 54/180 (30%), Positives = 81/180 (45%)
Frame = +1
Query: 115 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 294
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 295 PTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM 474
K V F N P+ L IP +V YLGV LDR +
Sbjct: 705 VQKCKQVTFT-----------------LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRL 747
Query: 475 TFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAART 654
T+R HI+ L+ ++ +RS LSL K LY + ++P+ TY S ++ +A+R+
Sbjct: 748 TWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRS 807
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 67.3 bits (157), Expect = 3e-11
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
LL+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V+F + + +P S + + GQ I SK YL
Sbjct: 767 DKWGISVNAAKTGHVIF------TLKNDLPTNSMN--------VKIKGQTIKKESKQSYL 812
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GVTLD +T H+ + + + +L +L RSKL + K+ + K+ + P+ YA
Sbjct: 813 GVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 579 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 638
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 639 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 684
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+ YA
Sbjct: 685 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+ YA
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+ YA
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 657 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 716
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 717 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 762
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+ YA
Sbjct: 763 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P+ YA
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 60.1 bits (139), Expect = 4e-09
Identities = 42/164 (25%), Positives = 72/164 (43%)
Frame = +1
Query: 166 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 345
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 337
Query: 346 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 525
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 338 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 389
Query: 526 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTT 657
+L ++ S L K+ L+K + P+ YA ++ T
Sbjct: 390 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDT 433
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 42/164 (25%), Positives = 72/164 (43%)
Frame = +1
Query: 166 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 345
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 784
Query: 346 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 525
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 785 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 526 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTT 657
+L ++ S L K+ L+K + P+ YA ++ T
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDT 880
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 42/164 (25%), Positives = 72/164 (43%)
Frame = +1
Query: 166 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 345
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 784
Query: 346 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 525
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 785 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 526 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTT 657
+L ++ S L K+ L+K + P+ YA ++ T
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDT 880
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 42/164 (25%), Positives = 72/164 (43%)
Frame = +1
Query: 166 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 345
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 784
Query: 346 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 525
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 785 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 526 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTT 657
+L ++ S L K+ L+K + P+ YA ++ T
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDT 880
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 59.7 bits (138), Expect = 6e-09
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Frame = +1
Query: 115 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 270
LL+S++ +D+P SP + L +ADDT + S + R + + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 271 RKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 450
KW I +N K+ V+F + + +P +++ + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIF------TLKNDLP--------TSLRTMKIKGQVIKIESKQSYL 800
Query: 451 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYA 624
GV LD +T H+ + + ++ +L RSKL + K+ + K+ + P+ YA
Sbjct: 801 GVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +1
Query: 412 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 591
G+ +P+V +YLG+T+ GM F HI ++R R ++G L +L + S R + T+Y
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
Query: 592 KTCIRPVMTYASVVFAHAA 648
+ P + + + V+ A
Sbjct: 785 DGLMAPCVLFGAPVWYDTA 803
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 42.7 bits (96), Expect = 7e-04
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 412 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 591
GQ I SK YLGV LD +T H+ + + ++ +L RSKL + K+ +
Sbjct: 3 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 62
Query: 592 KTCIRPVMTYA 624
K+ + P+ YA
Sbjct: 63 KSVLSPIWQYA 73
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 36.7 bits (81), Expect = 0.045
Identities = 34/130 (26%), Positives = 52/130 (40%)
Frame = +1
Query: 145 PRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK 324
PR E H FADD AI + + L +A+ +W K + I K+ VL
Sbjct: 637 PRGVELHC--FADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLL- 693
Query: 325 RGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVR 504
S R + + + + G I +KYLGV +DR ++F+ H +
Sbjct: 694 --------------SSRKSVECMR-VEVKGVEIASAETLKYLGVLIDRRLSFKAHARYAS 738
Query: 505 DRAAFILGRL 534
+AA L
Sbjct: 739 KKAAMTAAAL 748
>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
isoform C protein.
Length = 1293
Score = 33.1 bits (72), Expect = 0.55
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 238 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 417
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 418 PIP 426
+P
Sbjct: 818 NVP 820
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 33.1 bits (72), Expect = 0.55
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 238 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 417
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 418 PIP 426
+P
Sbjct: 818 NVP 820
>AE014298-836|AAF46116.2| 893|Drosophila melanogaster CG5921-PA,
isoform A protein.
Length = 893
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 468 RDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLHTPRHDVCKRSVRSRS 647
R+ I S NG R S T +N L S+ V P GN L P +
Sbjct: 686 RNSINSNNNNGFSRNRSNSNTNNNNRLQSQNGVNPANGNGSPELPPPPPQFANPQPKQMP 745
Query: 648 PHHLKSL 668
P H+K +
Sbjct: 746 PQHIKPM 752
>AE014298-835|AAN09159.1| 944|Drosophila melanogaster CG5921-PB,
isoform B protein.
Length = 944
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 468 RDDIPSPYKNGTRPRRVYSRTTLSNAL*SKQTVPPQ*GNSLQNLHTPRHDVCKRSVRSRS 647
R+ I S NG R S T +N L S+ V P GN L P +
Sbjct: 737 RNSINSNNNNGFSRNRSNSNTNNNNRLQSQNGVNPANGNGSPELPPPPPQFANPQPKQMP 796
Query: 648 PHHLKSL 668
P H+K +
Sbjct: 797 PQHIKPM 803
>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein.
Length = 1238
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 298 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 447
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 448 LGVTLDRG 471
G DRG
Sbjct: 1095 FGFG-DRG 1101
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 115 LLFSLYINDIPRSPETHLALFADDTAI 195
+L++LY DIP + + + FADDTAI
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFADDTAI 212
>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
protein.
Length = 1535
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 298 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 447
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 448 LGVTLDRG 471
G DRG
Sbjct: 1095 FGFG-DRG 1101
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 222 ASSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 344
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 225 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 344
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 379 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 501
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 379 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 501
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 379 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 501
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 379 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 501
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 225 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 344
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
>DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12
protein.
Length = 356
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 225 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQK 326
+S++ SS TV+P+VA + QP+E+R L +
Sbjct: 318 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSE 351
>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 9.0
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 294 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 473
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 474 DIPSPYKNGTR 506
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 9.0
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 294 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 473
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 474 DIPSPYKNGTR 506
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,801,643
Number of Sequences: 53049
Number of extensions: 853608
Number of successful extensions: 2409
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2394
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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