Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_B19
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.30
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 1.2
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 31 1.2
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.6
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 30 2.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.7
07_03_1136 + 24218601-24218734,24218769-24219906 29 3.7
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 4.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.9
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 6.5
04_01_0065 - 636957-637082,637165-637251,637365-637625,637695-63... 29 6.5
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 8.5
06_01_0145 + 1092764-1093351 28 8.5
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.5
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 8.5
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +1
Query: 670 VFPEXPPRXXPLGGRXPXSPXGAPXXPXPPGXXXXPLP 783
V P PP G P +P GAP P PPG P P
Sbjct: 1182 VAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 664 PXVFPEXPP--RXXPLGGRXPXSPXGAPXXPXPPGXXXXPLPXXXTXXPXXXXP 819
P FP+ PP PL P P P P PP P P P P
Sbjct: 298 PFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYPSP 351
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 658 NVPXVFPEXPPRXXPLGGRXPXSPXGAPXXPXPPGXXXXPLP 783
N P PPR P G P P G P P PP LP
Sbjct: 608 NTASALPPPPPR--PPGAPPPPPPPGKPGGPPPPPPRPGSLP 647
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 313 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVRGGS 143
H P AAA P VP++ P L + S GG GL S S + G + D G+ GGS
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGI-GGS 62
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 366 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 518
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 761 PGGXGXXGAPXGEXGXRPPXGXXRGGFSGKTXGTLP 654
PGG G P G G P G GGF G G P
Sbjct: 533 PGGMPGGGFPGGMPGGGFPGGMPGGGFPGGMPGGFP 568
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 676 PEXPPRXXPLGGRXPXSPXGAPXXPXPPGXXXXPLP 783
P PP G + P P P P PPG P P
Sbjct: 748 PAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPP 783
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +1
Query: 664 PXVFPEXPPRXXPLGGRXPXSPXGAPXXPXPPGXXXXPLPXXXTXXP 804
P ++ + PP P G P P P PP P P T P
Sbjct: 86 PQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 761 PGGXGXXGAPXGEXGXRPPXGXXRGG 684
PGG G G P G G RPP G GG
Sbjct: 92 PGGGGAPG-PLGGGGARPPGGGGGGG 116
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 685 PPRXXPLGGRXPXSPXGAPXXPXPPGXXXXPLP 783
PP P G P P G P P PP LP
Sbjct: 920 PPPPRPPGAPPPPPPPGKPGGPPPPPPPPGSLP 952
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 690 PGXXXGXPGXXFPXGXPXXPXPPXXXLXPPPXXXXP 797
P P P G P P PP + PPP P
Sbjct: 1177 PSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPP 1212
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 211 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 327
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>04_01_0065 -
636957-637082,637165-637251,637365-637625,637695-638100,
640036-640223
Length = 355
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -3
Query: 265 FVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVRGGSPDRTLRGASRS*GTVMLRF 86
++ +H C+ G G+ N+S+ + D + G SPD L G + ++ R
Sbjct: 6 YLQSLHFN-CIRLPDGAGVVNMSLPIVLAIGDREKEEIGSSPDVALHGPDGAVLAILRRV 64
Query: 85 RILPH 71
I PH
Sbjct: 65 EIYPH 69
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 217 VHRANTGRSSNELDRQTTELERRGVG 294
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>06_01_0145 + 1092764-1093351
Length = 195
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 782 GRGXKXXPGGXGXXGAPXGEXGXRPPXGXXRGGFSG 675
G G PGG G G P G+ G P RGG G
Sbjct: 100 GAGGNAGPGGVGGKGGPGGDGG--PGGIGGRGGDGG 133
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 395 GRGERSPRRWLQPRLAVPRQASTSVPRTP 309
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 392 RGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNS 270
R RSPRR P R + + R+PA S +P+R++S
Sbjct: 224 RDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,159,710
Number of Sequences: 37544
Number of extensions: 577115
Number of successful extensions: 2221
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2123
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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