Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_B04
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens ... 31 5.5
Z50194-1|CAA90576.1| 400|Homo sapiens PQ-rich protein protein. 30 9.5
BC130427-1|AAI30428.1| 312|Homo sapiens PHLDA1 protein protein. 30 9.5
BC126425-1|AAI26426.2| 259|Homo sapiens PHLDA1 protein protein. 30 9.5
BC110820-1|AAI10821.1| 259|Homo sapiens PHLDA1 protein protein. 30 9.5
BC018929-1|AAH18929.3| 259|Homo sapiens PHLDA1 protein protein. 30 9.5
AF239986-1|AAF64165.1| 400|Homo sapiens apoptosis-associated nu... 30 9.5
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ40198 fis, clone TESTI2019975, weakly similar to
TRICHOHYALIN. ).
Length = 621
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 516 RPYASSHPPLRSRLHQPDH-QIPEF-HTPXHPRLNIHFHQSPE 638
+P+ +HP L + H P H +P H P HP L H S E
Sbjct: 6 QPHLPTHPHLPTHPHLPTHPHLPTHPHVPTHPHLPTHPMMSKE 48
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 483 PFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXHPRLNIHFHQS 632
P + +H + + P+ +HP L + H P H H P HP ++ QS
Sbjct: 7 PHLPTHPHLPTHPHLPTHPHLPTHPHVPTHP----HLPTHPMMSKETRQS 52
>Z50194-1|CAA90576.1| 400|Homo sapiens PQ-rich protein protein.
Length = 400
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXH 602
HP+ H + S P++ HP HQ H P+ H+ H
Sbjct: 348 HPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPH 388
>BC130427-1|AAI30428.1| 312|Homo sapiens PHLDA1 protein protein.
Length = 312
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXH 602
HP+ H + S P++ HP HQ H P+ H+ H
Sbjct: 260 HPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPH 300
>BC126425-1|AAI26426.2| 259|Homo sapiens PHLDA1 protein protein.
Length = 259
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXH 602
HP+ H + S P++ HP HQ H P+ H+ H
Sbjct: 207 HPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPH 247
>BC110820-1|AAI10821.1| 259|Homo sapiens PHLDA1 protein protein.
Length = 259
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXH 602
HP+ H + S P++ HP HQ H P+ H+ H
Sbjct: 207 HPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPH 247
>BC018929-1|AAH18929.3| 259|Homo sapiens PHLDA1 protein protein.
Length = 259
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXH 602
HP+ H + S P++ HP HQ H P+ H+ H
Sbjct: 207 HPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPH 247
>AF239986-1|AAF64165.1| 400|Homo sapiens apoptosis-associated
nuclear protein protein.
Length = 400
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPXH 602
HP+ H + S P++ HP HQ H P+ H+ H
Sbjct: 348 HPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPH 388
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,432,365
Number of Sequences: 237096
Number of extensions: 2494618
Number of successful extensions: 5270
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5231
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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