Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_FL5_A10
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.008
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.008
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 31 0.010
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.010
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.22
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.008
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 359 PGTTIELTCEAAGSPAPSVHW 421
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 30.3 bits (65), Expect = 0.024
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 623 ELSERAKLFSLKPRIVVSYSTYVDNIGTGVVLPCRVKGHPKPKITW 760
+ S +L + P ++ S+ G V L C G+P P++TW
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 27.5 bits (58), Expect = 0.17
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +2
Query: 389 AAGSPAPSVHWFKN-DSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQDV--YTCL 559
AAG P ++ W K+ SP + + N L ++ + + SS L +T ++ YTC+
Sbjct: 635 AAGDPPLTISWLKDGQSP---FPLPPN-LASANISQLDPYSSLLSITNLAAEHSGDYTCV 690
Query: 560 XXXXXXXXXXXXVVYNTDSATELSERAKL-FSLKPRIVVSYSTYVDNIGTGVVLPCRVKG 736
+ A E+ AKL + PR +V + V L C+ +G
Sbjct: 691 A---------------ANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQG 735
Query: 737 HPKPKITW 760
P P I W
Sbjct: 736 VPTPTIVW 743
Score = 27.5 bits (58), Expect = 0.17
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Frame = +2
Query: 371 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 544
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 782
Query: 545 VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFSLKPRIVVSYSTYVDNIGTGVVLPC 724
Y C V +S+ + ++L ++K G L C
Sbjct: 783 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 829
Query: 725 RVKGHPKPKITWFNGQNVXI 784
V G +TW G + +
Sbjct: 830 EVHGDTPVTVTWLKGGKIEL 849
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +2
Query: 338 LPSYAHTPGTTIELTCEAAGSPAPSVHW 421
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 22.6 bits (46), Expect = 4.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +2
Query: 296 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 433
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.008
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 359 PGTTIELTCEAAGSPAPSVHW 421
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 30.3 bits (65), Expect = 0.024
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 623 ELSERAKLFSLKPRIVVSYSTYVDNIGTGVVLPCRVKGHPKPKITW 760
+ S +L + P ++ S+ G V L C G+P P++TW
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 27.5 bits (58), Expect = 0.17
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Frame = +2
Query: 371 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 544
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 778
Query: 545 VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFSLKPRIVVSYSTYVDNIGTGVVLPC 724
Y C V +S+ + ++L ++K G L C
Sbjct: 779 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 825
Query: 725 RVKGHPKPKITWFNGQNVXI 784
V G +TW G + +
Sbjct: 826 EVHGDTPVTVTWLKGGKIEL 845
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +2
Query: 338 LPSYAHTPGTTIELTCEAAGSPAPSVHW 421
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 25.4 bits (53), Expect = 0.67
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 617 ATELSERAKLF-SLKPRIVVSYSTYVDNIGTGVVLPCRVKGHPKPKITW 760
A E+S +L + PR +V + V L C+ +G P P I W
Sbjct: 691 AAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVW 739
Score = 22.6 bits (46), Expect = 4.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +2
Query: 296 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 433
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 31.5 bits (68), Expect = 0.010
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 701 GTGVVLPCRVKGHPKPKITW 760
GTG V+ C+ +G+P+P I W
Sbjct: 18 GTGAVVECQARGNPQPDIIW 37
Score = 28.3 bits (60), Expect = 0.095
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 359 PGTTIELTCEAAGSPAPSVHW---FKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTR 529
PG ++ L C A+G+P P + W K S V ++ S ISS T
Sbjct: 407 PGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISS----TH 462
Query: 530 TTSQDVYTCL 559
T +Y C+
Sbjct: 463 TNDGGLYKCI 472
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 650 SLKPRIVVSYSTYVDNIGTGVVLPCRVKGHPKPKITW 760
++ PR ++ + G+ + C+ G PKP++TW
Sbjct: 676 NVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTW 712
Score = 27.1 bits (57), Expect = 0.22
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 4/143 (2%)
Frame = +2
Query: 371 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD- 544
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVEDS 282
Query: 545 -VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFSLKPRIVVSYSTYVDNIGTGVVLP 721
Y C + N E E + + ST + G
Sbjct: 283 GKYLC--------------IVNNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFT 328
Query: 722 CRVKGHPKPKITWF-NGQNVXIE 787
C V+G+P ++W +G+ + +E
Sbjct: 329 CNVRGNPIKTVSWLKDGKPLGLE 351
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 659 PRIVVSYSTYVDNIGTGVVLPCRVKGHPKPKITW 760
P+I +++ G + L C G+P P+ITW
Sbjct: 394 PQIRQAFAEETLQPGPSMFLKCVASGNPTPEITW 427
Score = 26.6 bits (56), Expect = 0.29
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 362 GTTIELTCEAAGSPAPSVHWFKND 433
GT + C+A G+P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 26.6 bits (56), Expect = 0.29
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +2
Query: 632 ERAKLFSLKP--RIVVSYSTYVDNIGT----GVVLPCRVKGHPKPKITW 760
E +K+ +L P R+ +++ D V LPC G P P++TW
Sbjct: 1262 EASKIVALAPSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTW 1310
Score = 26.2 bits (55), Expect = 0.38
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 362 GTTIELTCEAAGSPAPSVHWFKNDSPV 442
G TC G+P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 25.0 bits (52), Expect = 0.89
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 350 AHTPGTTIELTCEAAGSPAPSVHWFK--NDSP 439
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.0 bits (52), Expect = 0.89
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 371 IELTCEAAGSPAPSVHW 421
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.010
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 377 LTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 502
+ C AG P P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 698 IGTGVVLPCRVKGHPKPKITW 760
+G V + C V G P P + W
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVW 344
Score = 22.2 bits (45), Expect = 6.3
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 722 CRVKGHPKPKITW 760
C V G P P++ W
Sbjct: 423 CHVAGEPLPRVQW 435
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.1 bits (57), Expect = 0.22
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 362 GTTIELTCEAAGSPAPSVHWFKNDSPVYEY 451
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
Score = 25.4 bits (53), Expect = 0.67
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 698 IGTGVVLPCRVKGHPKPKITW 760
+G + C G P+P+ITW
Sbjct: 36 LGRKITFFCMATGFPRPEITW 56
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,917
Number of Sequences: 438
Number of extensions: 4318
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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