Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_P13
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    29   2.9  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    28   6.7  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    28   6.7  
U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/71 (28%), Positives = 25/71 (35%)
 Frame = +1

Query: 553  SRSTXANTXPAPXPLXPGXPSPEQTXGXIAPAXLPPXXGSXXLXPKXXXNPVTSPXSLXR 732
            S ST  ++ P+P P  P  P P      + P   PP   S    P     PV  P  L  
Sbjct: 1327 SFSTSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSK--APTGVPLPVPPPPPLFS 1384

Query: 733  XXLXFLXXXPP 765
              +      PP
Sbjct: 1385 PSMILPPPPPP 1395


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/63 (26%), Positives = 20/63 (31%)
 Frame = +1

Query: 529 ARXPAXXXSRSTXANTXPAPXPLXPGXPSPEQTXGXIAPAXLPPXXGSXXLXPKXXXNPV 708
           AR P    S  T       P P  P   +PE     + P   PP   S  + P     P 
Sbjct: 572 ARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPP 631

Query: 709 TSP 717
             P
Sbjct: 632 PPP 634


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/63 (26%), Positives = 20/63 (31%)
 Frame = +1

Query: 529 ARXPAXXXSRSTXANTXPAPXPLXPGXPSPEQTXGXIAPAXLPPXXGSXXLXPKXXXNPV 708
           AR P    S  T       P P  P   +PE     + P   PP   S  + P     P 
Sbjct: 398 ARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPP 457

Query: 709 TSP 717
             P
Sbjct: 458 PPP 460


>U23181-6|AAC48204.1|  801|Caenorhabditis elegans Hypothetical
           protein ZK84.1 protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/65 (27%), Positives = 23/65 (35%)
 Frame = +1

Query: 523 PAARXPAXXXSRSTXANTXPAPXPLXPGXPSPEQTXGXIAPAXLPPXXGSXXLXPKXXXN 702
           PAA   A   + S+     PAP P     P+P        PA  P    +    P     
Sbjct: 534 PAAEAAAGYDAPSSVPEETPAPAPAADETPAPAPA-AEETPAPAPAAEETPAPAPAAEET 592

Query: 703 PVTSP 717
           P T+P
Sbjct: 593 PATAP 597


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,741,971
Number of Sequences: 27780
Number of extensions: 120444
Number of successful extensions: 396
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)