Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_P10
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 89 2e-17
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 89 2e-17
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 89 2e-17
BC113702-1|AAI13703.1| 1322|Homo sapiens FERM and PDZ domain con... 31 6.7
BC113700-1|AAI13701.1| 1322|Homo sapiens FERM and PDZ domain con... 31 6.7
BC032099-1|AAH32099.1| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.7
BC006132-1|AAH06132.2| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.7
AL451085-7|CAI13244.1| 406|Homo sapiens pygopus homolog 2 (Dros... 31 6.7
AL451085-6|CAI13243.1| 369|Homo sapiens pygopus homolog 2 (Dros... 31 6.7
AK092389-1|BAC03877.1| 406|Homo sapiens protein ( Homo sapiens ... 31 6.7
AF457208-1|AAL91371.1| 406|Homo sapiens pygopus 2 protein. 31 6.7
AB002314-1|BAA20774.3| 1379|Homo sapiens KIAA0316 protein protein. 31 6.7
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 8.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 8.8
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/98 (40%), Positives = 58/98 (59%)
Frame = -2
Query: 735 EDLASLLTAXESDPDPGVRHGLARLXVDTPPFERAQRHRLDSETVVHRIWNNINSNLSND 556
E+L LL ++DP P VRH + + PPF + L +E +V ++W +NS S+D
Sbjct: 905 EELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHD 964
Query: 555 ARLRCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 442
RLRC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 965 WRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 1002
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/98 (40%), Positives = 58/98 (59%)
Frame = -2
Query: 735 EDLASLLTAXESDPDPGVRHGLARLXVDTPPFERAQRHRLDSETVVHRIWNNINSNLSND 556
E+L LL ++DP P VRH + + PPF + L +E +V ++W +NS S+D
Sbjct: 895 EELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHD 954
Query: 555 ARLRCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 442
RLRC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 955 WRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 992
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/98 (40%), Positives = 58/98 (59%)
Frame = -2
Query: 735 EDLASLLTAXESDPDPGVRHGLARLXVDTPPFERAQRHRLDSETVVHRIWNNINSNLSND 556
E+L LL ++DP P VRH + + PPF + L +E +V ++W +NS S+D
Sbjct: 905 EELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHD 964
Query: 555 ARLRCDLVDLYYTLYGAKRPICCPLPEIQAMIKQNHQK 442
RLRC VDLY+TL+G RP C PLPE+ ++ +K
Sbjct: 965 WRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKK 1002
>BC113702-1|AAI13703.1| 1322|Homo sapiens FERM and PDZ domain
containing 4 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -2
Query: 345 QEIDDVKYES--TIGPMTSTALLD---NKMDVTDENVLPVPLSSIKEEDVKIDVTTVSTE 181
++ D+V E +G M A+L+ + D+ D LP P E+D + ++
Sbjct: 749 EDEDEVSCEEDLVVGEMNQPAILNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIA 808
Query: 180 IPLRVFNDDSKREFSSDNAVALP 112
P F D S E S A + P
Sbjct: 809 APPPGFRDSSDEEDSQSQAASFP 831
>BC113700-1|AAI13701.1| 1322|Homo sapiens FERM and PDZ domain
containing 4 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -2
Query: 345 QEIDDVKYES--TIGPMTSTALLD---NKMDVTDENVLPVPLSSIKEEDVKIDVTTVSTE 181
++ D+V E +G M A+L+ + D+ D LP P E+D + ++
Sbjct: 749 EDEDEVSCEEDLVVGEMNQPAILNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIA 808
Query: 180 IPLRVFNDDSKREFSSDNAVALP 112
P F D S E S A + P
Sbjct: 809 APPPGFRDSSDEEDSQSQAASFP 831
>BC032099-1|AAH32099.1| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 177 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>BC006132-1|AAH06132.2| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 177 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AL451085-7|CAI13244.1| 406|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 177 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AL451085-6|CAI13243.1| 369|Homo sapiens pygopus homolog 2
(Drosophila) protein.
Length = 369
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 177 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 126 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 172
>AK092389-1|BAC03877.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ35070 fis, clone PLACE5000139. ).
Length = 406
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 177 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AF457208-1|AAL91371.1| 406|Homo sapiens pygopus 2 protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 177 PLRVFNDDSKREFSSDNAVALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
P + FN + FS + +PG G GP+ P M +P + ELG P
Sbjct: 163 PSQPFNQPLGQNFSPPSGQMMPGPVGGFGPM-ISPTMGQPPRAELGPP 209
>AB002314-1|BAA20774.3| 1379|Homo sapiens KIAA0316 protein protein.
Length = 1379
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -2
Query: 345 QEIDDVKYES--TIGPMTSTALLD---NKMDVTDENVLPVPLSSIKEEDVKIDVTTVSTE 181
++ D+V E +G M A+L+ + D+ D LP P E+D + ++
Sbjct: 806 EDEDEVSCEEDLVVGEMNQPAILNLSGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIA 865
Query: 180 IPLRVFNDDSKREFSSDNAVALP 112
P F D S E S A + P
Sbjct: 866 APPPGFRDSSDEEDSQSQAASFP 888
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 123 VALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
+ LPG+PG G +GF PG P + E+G P
Sbjct: 2359 LGLPGLPGAPGVVGF-PGQTGP-RGEMGQP 2386
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 123 VALPGIPGTSGPIGFEPGMFRPLKDELGAP 34
+ LPG+PG G +GF PG P + E+G P
Sbjct: 2391 LGLPGLPGAPGVVGF-PGQTGP-RGEMGQP 2418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,033,209
Number of Sequences: 237096
Number of extensions: 1847770
Number of successful extensions: 7974
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7878
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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