Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_O18
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 36 0.18
CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 36 0.18
BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 36 0.18
BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 36 0.18
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 33 0.97
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein. 32 2.3
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni... 32 2.3
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte... 32 2.3
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto... 32 2.3
BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein. 32 3.0
AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B pr... 32 3.0
AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein. 32 3.0
AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like pro... 32 3.0
AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threoni... 32 3.0
AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein. 32 3.0
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 31 5.2
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 31 5.2
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 31 5.2
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 31 5.2
AK074675-1|BAC11129.1| 252|Homo sapiens protein ( Homo sapiens ... 31 5.2
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 31 5.2
DQ345517-1|ABC69270.1| 140|Homo sapiens stromal cell-derived fa... 31 6.9
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 30 9.1
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 30 9.1
>L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha
protein.
Length = 598
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 656 GNSLXNLHTPRYDVCKRSVRSRSPHQLEAPSGYS 555
G+ + TP + KRSV +RSPHQL +PS +S
Sbjct: 119 GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein.
Length = 598
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 656 GNSLXNLHTPRYDVCKRSVRSRSPHQLEAPSGYS 555
G+ + TP + KRSV +RSPHQL +PS +S
Sbjct: 119 GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 656 GNSLXNLHTPRYDVCKRSVRSRSPHQLEAPSGYS 555
G+ + TP + KRSV +RSPHQL +PS +S
Sbjct: 119 GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed),
alpha 2 (70kD subunit) protein.
Length = 598
Score = 35.9 bits (79), Expect = 0.18
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 656 GNSLXNLHTPRYDVCKRSVRSRSPHQLEAPSGYS 555
G+ + TP + KRSV +RSPHQL +PS +S
Sbjct: 119 GSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFS 152
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 33.5 bits (73), Expect = 0.97
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = -2
Query: 401 RSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSEL 222
RSR + + S+ + S+S + SS S + + SSS S ++ SSTS
Sbjct: 428 RSRGRARNKTSKSRSRSSSSSSS----SSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGS 483
Query: 221 THRHSPLSFSPDLLSGSRFRSGGR 150
+ R S S S S SR RS GR
Sbjct: 484 SSRDSSSSTSTSSSSESRSRSRGR 507
>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
Length = 1566
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103
>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
protein.
Length = 1581
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118
>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP205
protein.
Length = 1566
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103
>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP220
protein.
Length = 1581
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 359 GKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSE 225
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118
>BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein.
Length = 473
Score = 31.9 bits (69), Expect = 3.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 377 RPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSELTHRHSPL- 201
RP R + + + A GS AL +H S S +T S+S L+ SP+
Sbjct: 89 RPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVF 148
Query: 200 SFSPDLLSGSRFRSGG 153
SFSP+ +G R GG
Sbjct: 149 SFSPEPGAGDEARGGG 164
>AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B
protein.
Length = 778
Score = 31.9 bits (69), Expect = 3.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 377 RPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSELTHRHSPL- 201
RP R + + + A GS AL +H S S +T S+S L+ SP+
Sbjct: 394 RPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVF 453
Query: 200 SFSPDLLSGSRFRSGG 153
SFSP+ +G R GG
Sbjct: 454 SFSPEPGAGDEARGGG 469
>AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein.
Length = 778
Score = 31.9 bits (69), Expect = 3.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 377 RPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSELTHRHSPL- 201
RP R + + + A GS AL +H S S +T S+S L+ SP+
Sbjct: 394 RPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVF 453
Query: 200 SFSPDLLSGSRFRSGG 153
SFSP+ +G R GG
Sbjct: 454 SFSPEPGAGDEARGGG 469
>AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like
protein protein.
Length = 778
Score = 31.9 bits (69), Expect = 3.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 377 RPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSELTHRHSPL- 201
RP R + + + A GS AL +H S S +T S+S L+ SP+
Sbjct: 394 RPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVF 453
Query: 200 SFSPDLLSGSRFRSGG 153
SFSP+ +G R GG
Sbjct: 454 SFSPEPGAGDEARGGG 469
>AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threonine
protein kinase protein.
Length = 794
Score = 31.9 bits (69), Expect = 3.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 377 RPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSELTHRHSPL- 201
RP R + + + A GS AL +H S S +T S+S L+ SP+
Sbjct: 410 RPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVF 469
Query: 200 SFSPDLLSGSRFRSGG 153
SFSP+ +G R GG
Sbjct: 470 SFSPEPGAGDEARGGG 485
>AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein.
Length = 715
Score = 31.9 bits (69), Expect = 3.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 377 RPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSELTHRHSPL- 201
RP R + + + A GS AL +H S S +T S+S L+ SP+
Sbjct: 331 RPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVF 390
Query: 200 SFSPDLLSGSRFRSGG 153
SFSP+ +G R GG
Sbjct: 391 SFSPEPGAGDEARGGG 406
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 31.1 bits (67), Expect = 5.2
Identities = 32/92 (34%), Positives = 41/92 (44%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S S S+ S A
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGS--STSTGSSSGSSSSSA 102
Query: 245 TKSSTSELTHRHSPLSFSPDLLSGSRFRSGGR 150
+ S S T R S S S S SR R R
Sbjct: 103 SSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.1 bits (67), Expect = 5.2
Identities = 32/92 (34%), Positives = 41/92 (44%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S S S+ S A
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGS--STSTGSSSGSSSSSA 102
Query: 245 TKSSTSELTHRHSPLSFSPDLLSGSRFRSGGR 150
+ S S T R S S S S SR R R
Sbjct: 103 SSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.1 bits (67), Expect = 5.2
Identities = 32/92 (34%), Positives = 41/92 (44%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S S S+ S A
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGS--STSTGSSSGSSSSSA 102
Query: 245 TKSSTSELTHRHSPLSFSPDLLSGSRFRSGGR 150
+ S S T R S S S S SR R R
Sbjct: 103 SSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.1 bits (67), Expect = 5.2
Identities = 32/92 (34%), Positives = 41/92 (44%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S S S+ S A
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGS--STSTGSSSGSSSSSA 102
Query: 245 TKSSTSELTHRHSPLSFSPDLLSGSRFRSGGR 150
+ S S T R S S S S SR R R
Sbjct: 103 SSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 134
>AK074675-1|BAC11129.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ90194 fis, clone MAMMA1001284. ).
Length = 252
Score = 31.1 bits (67), Expect = 5.2
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = -2
Query: 380 TRPSRPNGKPSTSPKA-RHYGSS*SINGALRHHKHRSPSSSNPSLATKSSTSEL-THRHS 207
++ S PN P+TSP R + S +G S S S P+ TK T L +++H
Sbjct: 131 SKESSPNSNPATSPGGIRFFSRSRKTSGL-------SSSPSTPTQVTKQHTFPLESYKHE 183
Query: 206 PLSFSPDL-LSGSRFRSGGRFCEAXXXXXXXXXXXXLSPASSPTNVRVKLK*PLKAISIG 30
P + S S +G RFC + P +SPT+ P KA+S+G
Sbjct: 184 PERLENRIYASSSPPDTGQRFCPS------SFQSPTRPPLASPTHYA-----PSKAVSLG 232
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 31.1 bits (67), Expect = 5.2
Identities = 32/92 (34%), Positives = 41/92 (44%)
Frame = -2
Query: 425 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLA 246
G T E S + R + TR R S+S ++R SS S +G+ S S S+ S A
Sbjct: 24 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGS--STSTGSSSGSSSSSA 79
Query: 245 TKSSTSELTHRHSPLSFSPDLLSGSRFRSGGR 150
+ S S T R S S S S SR R R
Sbjct: 80 SSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR 111
>DQ345517-1|ABC69270.1| 140|Homo sapiens stromal cell-derived
factor 1 delta protein.
Length = 140
Score = 30.7 bits (66), Expect = 6.9
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = -3
Query: 598 AHAARTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLELDSVSKYLQSASLRHFEKAAR 419
+H AR N+K L+++ + C + + A N + D +L + +YL+ A L + AA
Sbjct: 37 SHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKA-LNNLISAAP 95
Query: 418 HENPLIVAAGNYIPDP 371
+I A P P
Sbjct: 96 AGKRVIAGARALHPSP 111
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 30.3 bits (65), Expect = 9.1
Identities = 29/84 (34%), Positives = 39/84 (46%)
Frame = -2
Query: 413 EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSS 234
EP RSR + R SR G+ S SP+ RH S + + + RS S S ++S
Sbjct: 94 EPRGRSRGGGYGRRSRSYGRRSRSPRRRHRSRSRGPSCS----RSRSRSRYRGSRYSRSP 149
Query: 233 TSELTHRHSPLSFSPDLLSGSRFR 162
S + S S SP S SR+R
Sbjct: 150 YSRSPYSRSRYSRSP--YSRSRYR 171
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 30.3 bits (65), Expect = 9.1
Identities = 29/84 (34%), Positives = 39/84 (46%)
Frame = -2
Query: 413 EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGALRHHKHRSPSSSNPSLATKSS 234
EP RSR + R SR G+ S SP+ RH S + + + RS S S ++S
Sbjct: 104 EPRGRSRGGGYGRRSRSYGRRSRSPRRRHRSRSRGPSCS----RSRSRSRYRGSRYSRSP 159
Query: 233 TSELTHRHSPLSFSPDLLSGSRFR 162
S + S S SP S SR+R
Sbjct: 160 YSRSPYSRSRYSRSP--YSRSRYR 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,782,055
Number of Sequences: 237096
Number of extensions: 2414548
Number of successful extensions: 9830
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9798
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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