Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_O09
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U58758-7|AAO38576.1|  220|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical pr...    29   4.2  

>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = +3

Query: 558 PGAPTAEHXRPSANPVCRGRVLPGKTTSGXIXPRPXLPTXRXXGPXLLXSGNGNTXPSXP 737
           PGAP       S  P   G   PG+ T+G   P P +P     GP  +  G G    + P
Sbjct: 212 PGAPQVPQAPNSFIPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPG-MPRAFP 270

Query: 738 PXA 746
           P A
Sbjct: 271 PGA 273


>U58758-7|AAO38576.1|  220|Caenorhabditis elegans Hypothetical
           protein ZK1127.9d protein.
          Length = 220

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
 Frame = -2

Query: 751 NGAXGGXDGIVXPLPDXR-RXGPXXRKVGSXGRGXXFPDVVLPGRTRPRXTGLADGR 584
           NG  GG        P  R R GP     G  GRG  F    +     PR  G+  GR
Sbjct: 41  NGPPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPPGR 97


>U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical
           protein ZK1127.9a protein.
          Length = 914

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
 Frame = -2

Query: 751 NGAXGGXDGIVXPLPDXR-RXGPXXRKVGSXGRGXXFPDVVLPGRTRPRXTGLADGR 584
           NG  GG        P  R R GP     G  GRG  F    +     PR  G+  GR
Sbjct: 50  NGPPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPPGR 106


>U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical
           protein ZK1127.9b protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
 Frame = -2

Query: 751 NGAXGGXDGIVXPLPDXR-RXGPXXRKVGSXGRGXXFPDVVLPGRTRPRXTGLADGR 584
           NG  GG        P  R R GP     G  GRG  F    +     PR  G+  GR
Sbjct: 41  NGPPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPPGR 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,234,472
Number of Sequences: 27780
Number of extensions: 160717
Number of successful extensions: 431
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)