Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_O08
(781 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 188 4e-48
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 188 4e-48
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 30 1.8
04_04_0148 - 23114000-23114113,23114215-23114350,23114813-231149... 30 1.8
11_04_0093 + 13407686-13409554 29 4.1
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.2
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 188 bits (458), Expect = 4e-48
Identities = 94/167 (56%), Positives = 118/167 (70%)
Frame = -1
Query: 778 RQKKAHIMEIQLNXGTXGDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHF 599
+QKKAH+MEIQ+N GT DKV + + EK IPVD+VF +DEMID IGVT+G+ +
Sbjct: 175 KQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGV-V 233
Query: 598 SLAHKEATPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 419
+ P + + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG---- 289
Query: 418 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
K G+ + A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 290 -KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 92.7 bits (220), Expect = 3e-19
Identities = 66/170 (38%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Frame = -2
Query: 627 KGKGYKGVTSRWHTKKLPP*DTPRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TR 448
KGKGY+GV +RW +LP T R L K+ + G R V TV + +
Sbjct: 225 KGKGYEGVVTRWGVTRLPR-KTHRGLRKVACI--GAWHPAR---------VSYTVARAGQ 272
Query: 447 KSIVLDKESTKRMAKLLKTMHLLSMTCLRNPLHQWEVSPI-------MVK*TTTL**XKG 289
E K++ K+ K+ C + +++P+ +VK + KG
Sbjct: 273 NGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLM--IKG 330
Query: 288 CCMGPKKRIITLRKSLRVHTKRAALEKIDLKFIDTSSKFGHGRFQTPADK 139
CC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 188 bits (458), Expect = 4e-48
Identities = 94/167 (56%), Positives = 118/167 (70%)
Frame = -1
Query: 778 RQKKAHIMEIQLNXGTXGDKVKWXREHLEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHF 599
+QKKAH+MEIQ+N GT DKV + + EK IPVD+VF +DEMID IGVT+G+ +
Sbjct: 175 KQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGV-V 233
Query: 598 SLAHKEATPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 419
+ P + + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG---- 289
Query: 418 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
K G+ + A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 290 -KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 99 bits (238), Expect = 2e-21
Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Frame = -2
Query: 627 KGKGYKGVTSRWHTKKLPP*DTPRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TR 448
KGKGY+GV +RW +LP T R L K+ + G R V TV + +
Sbjct: 225 KGKGYEGVVTRWGVTRLPR-KTHRGLRKVACI--GAWHPAR---------VSYTVARAGQ 272
Query: 447 KSIVLDKESTKRMAKLLKTMHLLSMTCLRNPLHQWEVSPI-------MVK*TTTL**XKG 289
E K++ K+ K+ C + +++P+ +VK + KG
Sbjct: 273 NGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLM--IKG 330
Query: 288 CCMGPKKRIITLRKSLRVHTKRAALEKIDLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
CC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 1 FFFFFFALSNVYFHGRHLRLRSSRWGCGSRSFFANTILLEC 123
FFFFFF +VY RH R R R R F ++ C
Sbjct: 102 FFFFFFFSGDVYCGHRHFRRRRRRRQWDGRLVFGSSGASAC 142
>04_04_0148 -
23114000-23114113,23114215-23114350,23114813-23114912,
23115003-23115113,23115197-23115234,23115359-23115429,
23116998-23117176,23117272-23117389
Length = 288
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -1
Query: 682 PVDSVFAQDEMIDCIGVTQGQRIQRCHFSLAHKEATPVRHTKXLRKVACIGAWHPSRVSF 503
P +F + CIG G +I R + H +++PVR+ + L K G +P F
Sbjct: 153 PTIPIFGVCMGLQCIGEAFGGKIIRAPSGVMHGKSSPVRYDEELGKALFNGLPNP----F 208
Query: 502 TVAR 491
T AR
Sbjct: 209 TAAR 212
>11_04_0093 + 13407686-13409554
Length = 622
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 513 LEGCQAPMQATFLRXLVCLTGVASLCANEK*HLCILCPWVTPMQSIISSWANTESTGIGF 692
++G Q P Q TFL L + +A+LC ++ H ++C + + + S G
Sbjct: 318 VQGIQ-PNQVTFLGSLDACSNLAALCEGQQVHQ-MICKTPSQFDTFVESTLMNLYAKCGE 375
Query: 693 SRCSLXHFTLSPMVPXLSWISIM*AF 770
R + F S +SW I+ A+
Sbjct: 376 IRLARNVFDFSMEKDLISWNGIIAAY 401
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -1
Query: 517 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 368
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 367 SEKSITPMGGFPHYGEVNN 311
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,522,372
Number of Sequences: 37544
Number of extensions: 499213
Number of successful extensions: 1263
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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