Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_O03
         (824 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003     29   4.5  
02_05_0073 - 25602268-25603182,25603273-25604190                       29   5.9  

>05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003
          Length = 385

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
 Frame = -2

Query: 622 PEXGPRX-HXLXSPGXSXRKRXFLLXXXPRXPCXPPTXPPXT 500
           P   P+  H    P  S R         PR PC PP  PP T
Sbjct: 8   PSHSPQSKHANAIPHASARPTHLHTFLIPRRPCPPPVRPPDT 49


>02_05_0073 - 25602268-25603182,25603273-25604190
          Length = 610

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 230 PHHALRSHDHSGSGVRSQVLERLEMRLRSGGGG 328
           P H++RS   S  G  + V+ R     RSGGGG
Sbjct: 560 PEHSVRSRAGSSGGNSNNVVHRGRGAHRSGGGG 592


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,292,050
Number of Sequences: 37544
Number of extensions: 184636
Number of successful extensions: 581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)