Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_N02
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 46 4e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 46 4e-07
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 41 2e-05
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.016
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 24 1.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = -1
Query: 212 PKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSEK 57
P W+ GQ I + +++L SGEL++S+L D +YTCQ ENA G++K
Sbjct: 1341 PTREWYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGNDK 1394
Score = 28.7 bits (61), Expect = 0.065
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = -1
Query: 239 RAAXKGHPKPKITW-FNGQNVPIEKNPRMK--VLRSGELV----ISSLLWSDMDEYTCQA 81
+ + G+P P++TW +G +P + V G+++ IS ++ D EY+C A
Sbjct: 442 KCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMA 501
Query: 80 ENAFG 66
EN G
Sbjct: 502 ENRAG 506
Score = 28.7 bits (61), Expect = 0.065
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = -1
Query: 227 KGHPKPKITWF------NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFG 66
+G P P I W +G+ + + K+L +G L++ + Y CQA N G
Sbjct: 734 QGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIG 793
Query: 65 S 63
S
Sbjct: 794 S 794
Score = 28.3 bits (60), Expect = 0.086
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Frame = -1
Query: 206 ITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSDMDEYTCQAENAFGSEK 57
+TW G + + N R+ V R +L ISS SD Y CQA N +G ++
Sbjct: 839 VTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASNLYGRDQ 897
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 608 IXPGTTIELTCEAAGS 561
+ PG + L C AAG+
Sbjct: 433 LQPGPAVSLKCSAAGN 448
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = -1
Query: 212 PKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSEK 57
P W+ GQ I + +++L SGEL++S+L D +YTCQ ENA G++K
Sbjct: 1337 PTREWYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGNDK 1390
Score = 28.7 bits (61), Expect = 0.065
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = -1
Query: 239 RAAXKGHPKPKITW-FNGQNVPIEKNPRMK--VLRSGELV----ISSLLWSDMDEYTCQA 81
+ + G+P P++TW +G +P + V G+++ IS ++ D EY+C A
Sbjct: 442 KCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMA 501
Query: 80 ENAFG 66
EN G
Sbjct: 502 ENRAG 506
Score = 28.7 bits (61), Expect = 0.065
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = -1
Query: 227 KGHPKPKITWF------NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFG 66
+G P P I W +G+ + + K+L +G L++ + Y CQA N G
Sbjct: 730 QGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDREGFYLCQASNGIG 789
Query: 65 S 63
S
Sbjct: 790 S 790
Score = 28.3 bits (60), Expect = 0.086
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Frame = -1
Query: 206 ITWFNGQNVPIEK--NPRMKVLRS-------GELVISSLLWSDMDEYTCQAENAFGSEK 57
+TW G + + N R+ V R +L ISS SD Y CQA N +G ++
Sbjct: 835 VTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQASNLYGRDQ 893
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 608 IXPGTTIELTCEAAGS 561
+ PG + L C AAG+
Sbjct: 433 LQPGPAVSLKCSAAGN 448
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 40.7 bits (91), Expect = 2e-05
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = -1
Query: 224 GHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFGSE 60
G P P++TW + ++ + R++ L G L I + +D EY+C EN FG +
Sbjct: 1302 GVPAPEVTW-KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHD 1355
Score = 27.9 bits (59), Expect = 0.11
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = -1
Query: 224 GHPKPKITWFN------GQNVPIE-KNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFG 66
G PKP++TW G ++ NP + V G L I+++ ++ Y C+A N G
Sbjct: 704 GFPKPQVTWKKAAGDTPGDYTDLKLSNPDISV-EDGTLSINNIQKTNEGYYLCEAVNGIG 762
Query: 65 S 63
+
Sbjct: 763 A 763
Score = 26.6 bits (56), Expect = 0.26
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Frame = -1
Query: 254 TGWCSRAAXKGHPKPKITWFNGQNVPIEKNPRMK-VLRSGELVISSLLWSDMDE------ 96
TG +G+P+P I W + P ++ VL +G LV D +
Sbjct: 19 TGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQV 78
Query: 95 YTCQAENAFGS 63
Y+C A + GS
Sbjct: 79 YSCLARSPAGS 89
Score = 25.0 bits (52), Expect = 0.80
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 146 RSGELVISSLLWSDMDEYTCQAENAFGSEKAKT 48
R L+IS + EY C AENA G+ T
Sbjct: 639 RVSMLMISVITARHAGEYVCTAENAAGTASHST 671
Score = 25.0 bits (52), Expect = 0.80
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -1
Query: 161 RMKVLRSG---ELVISSLLWSDMDEYTCQAENAFGSE 60
R ++L +G +L I SD +TC A NAFGS+
Sbjct: 828 REEILANGVLSDLSIKRTERSDSALFTCVATNAFGSD 864
Score = 23.0 bits (47), Expect = 3.2
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = -1
Query: 239 RAAXKGHPKPKITW-FNGQNVPIEKNPRM--KVLRSGELV----ISSLLWSDMDEYTCQA 81
+ G+P P+ITW +G+ + + ++ V +G++V ISS +D Y C A
Sbjct: 414 KCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIA 473
Query: 80 ENAFGS 63
+ GS
Sbjct: 474 ASKVGS 479
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 30.7 bits (66), Expect = 0.016
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 224 GHPKPKITWF-NGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQA 81
G P P + W NG ++ P ++V G L ++ + YTC A
Sbjct: 336 GTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHA 384
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -2
Query: 559 PAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 458
P P V W KND + + +LI + I +
Sbjct: 429 PLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 24.2 bits (50), Expect = 1.4
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = -1
Query: 224 GHPKPKITW-------FNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDEYTCQAENAFG 66
G P+P+ITW ++ + + + P ++ I D Y CQA+N +
Sbjct: 48 GFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAGYYECQADNQYA 107
Query: 65 SEK 57
++
Sbjct: 108 VDR 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,770
Number of Sequences: 438
Number of extensions: 3520
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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