Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_M24
         (833 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   4.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   4.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 230  WRPPVRRPWDG 198
            W+PP R  W+G
Sbjct: 997  WKPPPREDWNG 1007


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = +3

Query: 48  PRGRWGMWELNLTKNSCRSQPAPYLGPGRSPVGAIETARQG*RRAHYIHPTVPRTPD 218
           P   + +W      N  R  P  ++G      G    + +  R+A+Y+H   P  PD
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTNWVGV----FGGSAWSWREERQAYYLHQFAPEQPD 193


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = +3

Query: 48  PRGRWGMWELNLTKNSCRSQPAPYLGPGRSPVGAIETARQG*RRAHYIHPTVPRTPD 218
           P   + +W      N  R  P  ++G      G    + +  R+A+Y+H   P  PD
Sbjct: 141 PYNNYYIWHPGKIVNGKRVPPTNWVGV----FGGSAWSWREERQAYYLHQFAPEQPD 193


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 417 GSHPFCAGRDPDEGWRALHAHPQ 349
           GS    +G+    GW++++A PQ
Sbjct: 920 GSGIVASGQQHAGGWQSIYAQPQ 942


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 75  LNLTKNSCRSQPAPYLGP 128
           LNL+K S    P P +GP
Sbjct: 875 LNLSKKSPSPSPRPLVGP 892


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,128
Number of Sequences: 438
Number of extensions: 5625
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)