Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_M17
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.36
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.1
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.1
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 3.4
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.5
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.8
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 7.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 7.8
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 7.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 7.8
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -2
Query: 702 GVGXXXVXQGGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGG 556
G G GG G + GG G A G + G + GGS G GG
Sbjct: 220 GGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGG 268
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -2
Query: 675 GGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGGA 553
GG G S G G G G + GGS G +GG+
Sbjct: 219 GGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGS 259
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -2
Query: 702 GVGXXXVXQGGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGG 556
G G GG G + GG G A G + G + GGS G GG
Sbjct: 220 GGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGG 268
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -2
Query: 675 GGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGGA 553
GG G S G G G G + GGS G +GG+
Sbjct: 219 GGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGS 259
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPP 676
PP P PP PP P A G P E P PP
Sbjct: 133 PPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPP 172
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPP 676
PP P PP K P P P GPP P P
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSP 171
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPP 676
PP P PP K P P P GPP P P
Sbjct: 132 PPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSP 171
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPP 676
PP P PP K P P P GPP P P
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSP 171
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 615 PXPXLXCXXALPPXXXXPGPLGXXXXFXPPQXPTXXSSXPXPGXNPXXXPSGP 773
P P C P PGP G PP P PG P GP
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGP 186
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 560 PAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPP 676
P P PP + PP P + P PP P PP
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 1/75 (1%)
Frame = +3
Query: 552 TPPRXXXSPPRIHXGXXPXHXPX-PXLXCXXALPPXXXXPGPLGXXXXFXPPQXPTXXSS 728
T P PP P P P PP PGP G P P
Sbjct: 177 TCPAGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQ 236
Query: 729 XPXPGXNPXXXPSGP 773
PG N P GP
Sbjct: 237 PGAPGTNTVNSPGGP 251
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -2
Query: 711 AXAGVGXXXVXQGGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGGA 553
A G G GG G S GG + G AGG G S G GGA
Sbjct: 319 AGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGA 371
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +2
Query: 542 VAGNAPPAXXLXPTD--PPXXKXXPPAXPXAXLPXGPPXXEXXPWPPWXTXXLPTP 703
V APP+ L P P PP P +P P P PP +P P
Sbjct: 42 VTKQAPPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPP 97
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/77 (27%), Positives = 27/77 (35%)
Frame = -2
Query: 675 GGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGGAFPATXRWNKPXXCGFSRSS 496
GG G + GG G A G GG + G G GG + C S ++
Sbjct: 82 GGHGGAAVGGGYGG--AVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQCSPSSNT 139
Query: 495 CXIXGXMSXXSRLGXDG 445
C G + G DG
Sbjct: 140 CP-PGPRGPPGQAGLDG 155
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +2
Query: 554 APPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPPWXTXXLPTPA 706
APP P P PP P P G P +PP +PTP+
Sbjct: 772 APPGGRQAPMPPRGGPGAPPP-PGMRPPPGAPGGGGGMYPPLIPTRVPTPS 821
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +2
Query: 560 PAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPW-PPWXTXXLPT 700
PA P DP K P +P P W PPW +PT
Sbjct: 176 PAAAAKPRDPSPKKAAPSKEHDPIVPPTPIKNPAKKWKPPWEDDEVPT 223
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +2
Query: 554 APPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXPWPPWXTXXLPTPA 706
APP P P PP P P G P +PP +PTP+
Sbjct: 772 APPGGRQAPMPPRGGPGAPPP-PGMRPPPGAPGGGGGMYPPLIPTRVPTPS 821
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 672 GQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGGAFPA 544
G G GG G G GG GG G GGA P+
Sbjct: 473 GAGGFGSFGGGGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPS 515
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +3
Query: 540 PWRETPPRXXXSPPRIHXGXXPXHXPXPXLXCXXALPPXXXXPGP---LGXXXXFXPPQX 710
P+ PP PP G P P P +PP P P +G F PP
Sbjct: 285 PYAMMPPPFGFFPPPPR-GHFP---PPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPH 340
Query: 711 PTXXSSXPXPGXNPXXXP 764
P P P P P
Sbjct: 341 PMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +3
Query: 540 PWRETPPRXXXSPPRIHXGXXPXHXPXPXLXCXXALPPXXXXPGP---LGXXXXFXPPQX 710
P+ PP PP G P P P +PP P P +G F PP
Sbjct: 285 PYAMMPPPFGFFPPPPR-GHFP---PPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPH 340
Query: 711 PTXXSSXPXPGXNPXXXP 764
P P P P P
Sbjct: 341 PMMFRGGPYPPFFPPPPP 358
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 702 GVGXXXVXQGGQGXXSXXGGPXGXKAXGXAGGXXFXXGGSVGXXXXAGGAF 550
G G GG G GG G G GG + GG G GG F
Sbjct: 141 GGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGG---YGGGGF 188
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXP 667
PP PT PP K P P P GPP P
Sbjct: 134 PPVAPCEPTTPPPCKPCPQGPPG---PPGPPGAPGDP 167
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +3
Query: 615 PXPXLXCXXALPPXXXXPGPLGXXXXFXPPQXPTXXSSXPXPGXNPXXXPSGP 773
P P C P PGP G PP P G P GP
Sbjct: 132 PPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGP 184
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXP 667
PP PT PP K P P P GPP P
Sbjct: 129 PPVAPCEPTTPPPCKPCPQGPPG---PPGPPGAPGDP 162
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXP 667
PP PT PP K P P P GPP P
Sbjct: 136 PPTAPCEPTTPPPCKPCPQGPPG---PPGPPGAPGDP 169
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXP 667
PP PT PP K P P P GPP P
Sbjct: 129 PPVAPCEPTTPPPCKPCPQGPPG---PPGPPGAPGDP 162
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 557 PPAXXLXPTDPPXXKXXPPAXPXAXLPXGPPXXEXXP 667
PP PT PP K P P P GPP P
Sbjct: 136 PPTAPCEPTTPPPCKPCPQGPPG---PPGPPGAPGDP 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,653,714
Number of Sequences: 27780
Number of extensions: 170558
Number of successful extensions: 977
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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