Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_M13
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 167 6e-42
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 167 6e-42
11_04_0146 - 14091671-14092357,14092996-14093229 31 1.3
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329 29 5.1
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 29 5.1
11_06_0422 + 23338125-23339567 28 6.8
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 6.8
04_01_0592 + 7808821-7809210 28 6.8
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 167 bits (407), Expect = 6e-42
Identities = 76/116 (65%), Positives = 91/116 (78%)
Frame = -3
Query: 623 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 444
KGKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 443 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 276
+Y+IG K G+ + A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 285 VYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -1
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 137
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -2
Query: 678 PVDSVFAQDEMIDCICVTQGQ 616
PVD+VF +DEMID I VT+G+
Sbjct: 207 PVDAVFQKDEMIDIIGVTKGK 227
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 167 bits (407), Expect = 6e-42
Identities = 76/116 (65%), Positives = 91/116 (78%)
Frame = -3
Query: 623 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 444
KGKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 443 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 276
+Y+IG K G+ + A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 285 VYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -1
Query: 292 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -2
Query: 678 PVDSVFAQDEMIDCICVTQGQ 616
PVD+VF +DEMID I VT+G+
Sbjct: 207 PVDAVFQKDEMIDIIGVTKGK 227
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 617 KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAW 522
K YK T RWH K++ K K KV +W
Sbjct: 266 KIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSW 297
>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
Length = 264
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 617 KGYKGVTSRWHTKKLPRKTHKGLRKV 540
K YK T RWH K++ K K KV
Sbjct: 29 KIYKDKTKRWHDKRIKHKEFKAREKV 54
>01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 675 VDSVFAQDEMIDCICVTQGQRIQRCHFSLAHKEA 574
VDS F DE+ID C+ + + H L H A
Sbjct: 1121 VDSYFTWDEVIDACCLRISHDLVQQHVQLLHDRA 1154
>11_06_0422 + 23338125-23339567
Length = 480
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 640 LHLCHPRAKDTKVSLLVGTQRSYPVRHTRVLGKLP 536
LHL H R + S L T R + V H R+ G LP
Sbjct: 189 LHLDHNRIEGRVPSKLPATLRLFNVSHNRLTGVLP 223
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -3
Query: 515 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 366
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 365 SEKSITPMGGFPHYGEVNN 309
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
>04_01_0592 + 7808821-7809210
Length = 129
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 629 SPKGKGYKGVTSRWHTKKLPRKTHKGLRKV 540
S K YK T RWH K++ K K L KV
Sbjct: 25 SHNAKIYKERTKRWHDKRIKIKKFKPLDKV 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,288,939
Number of Sequences: 37544
Number of extensions: 431840
Number of successful extensions: 1081
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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