Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_M05
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 34 0.11
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.8
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 29 5.4
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.1
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 28 7.1
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 7.1
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 7.1
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 28 7.1
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 28 9.4
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 28 9.4
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 34.3 bits (75), Expect = 0.11
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -2
Query: 541 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP--Y*KEFAPGLKPPLSSEAPLAYLT 368
P+P + T+T +NP TPTT + +I +P P + P S+ AP A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 547
Query: 367 PSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPLATFQLLPSIPYCTTTS 206
P+S V PP + S +T T T Q P+ P TT S
Sbjct: 548 PTSPTTAPTV-PPVTTTTPTTTTST-----TTTTTTTTTTTQTTPTTPVVTTPS 595
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 32.7 bits (71), Expect = 0.33
Identities = 25/98 (25%), Positives = 40/98 (40%)
Frame = -2
Query: 541 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPLAYLTPS 362
P+P + T+T +NP TPTT TS N ++P+ + + AP +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 361 SLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPLAT 248
+ S P + S S +T P+P T
Sbjct: 549 TTPTHTTASQPTTTKPVVTTNSVTPSTGTTTVPVPTTT 586
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 558 PYASSHPPLRSRLHQPDHQIPDS 490
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 547 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLT 440
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.7 bits (61), Expect = 5.4
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Frame = -2
Query: 526 SATSTRSSNPRFHTPTTPDLTSISINPL--TPY*KEFAPGLKPPLSSEAPLAYLTPSSLG 353
S++S+ SS+ + +P +T I P P G PP Y P +G
Sbjct: 10 SSSSSSSSDGSYRSPVGFGVTPIMPLPYGAPPPPVGAGVGYAPPPPRPYGATYAPPPPMG 69
Query: 352 MXKGVSPP-YFQVNDESQASRLISRHSTHTPLPLATFQ--LLPSIPYCTTTSG 203
+ GV+P Y Q + + PLP +Q + PS P ++T G
Sbjct: 70 IGAGVNPSGYVQQAPPLPTQGYSAYNQQPPPLPQQPYQTNMYPSNPGYSSTPG 122
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 550 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 437
+ SPAI +T+T +++P+ T TP+ +T++ + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 550 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFA-PGLKPPLSSEAP 383
+ PP PA +A + + P + + ++NP TP + P PPLSS P
Sbjct: 166 VPPPPPAATAAVSMNGGGPGSAPGSAHSVNNNVNPGTPGSNPLSNPMSNPPLSSGPP 222
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -2
Query: 541 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 383
P+ S ++ + P T TP+LT++++ P+T K + P +++ P
Sbjct: 160 PATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLP 212
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = -2
Query: 550 IKPPSPAISATSTRSS--NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPLA 377
++ P+ + S+T ++S NP++H PT DL + P P + ++
Sbjct: 584 VETPTNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWP-APNFDRRRKSSETSFTTNTTTN 642
Query: 376 YLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPLATFQLLPSIP 224
LTPS+ + P + + + S+ + + P F L +P
Sbjct: 643 TLTPSTPVTPPVLRPAFSESKAPQEPSKPVETKENNKPALTDDFPLPEPLP 693
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Frame = -2
Query: 550 IKPPSPAISATSTRSS--NPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPLA 377
++ P+ + S+T ++S NP++H PT DL + P P + ++
Sbjct: 486 VETPTNSGSSTPPQTSVRNPKYHVPTPTDLPPPPVWP-APNFDRRRKSSETSFTTNTTTN 544
Query: 376 YLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPLATFQLLPSIP 224
LTPS+ + P + + + S+ + + P F L +P
Sbjct: 545 TLTPSTPVTPPVLRPAFSESKAPQEPSKPVETKENNKPALTDDFPLPEPLP 595
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 438 GVRGLMEMDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETANSNARG*RGG 599
G GL D G G G D V + + G+ G +GE N ++G RGG
Sbjct: 167 GPPGLAGQDGLDGAPGEPGVGGMDAVKIVSVDGKIG--RRGEAGNKGSKGSRGG 218
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -2
Query: 541 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-LAYLTP 365
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 364 SSLGMXKGVSPPYFQVNDESQASRLISR 281
++L S P V ++ ++R
Sbjct: 571 TNLYPTPPSSLPNTYVPNQESFDESVNR 598
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -2
Query: 541 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-LAYLTP 365
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 364 SSLGMXKGVSPPYFQVNDESQASRLISR 281
++L S P V ++ ++R
Sbjct: 571 TNLYPTPPSSLPNTYVPNQESFDESVNR 598
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,222,640
Number of Sequences: 27780
Number of extensions: 365102
Number of successful extensions: 1200
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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