Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_M03
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   3.1  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   3.1  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    30   4.1  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    30   4.1  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    30   4.1  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 32/122 (26%), Positives = 34/122 (27%), Gaps = 1/122 (0%)
 Frame = +2

Query: 401 PAPXXAXXXXRXAPPPLXXRLXXAFXPXIXXXXPXTXXXGXPXXPAXXXXXXXXXXXXPX 580
           PAP       R  PPP   +      P      P T     P  P             P 
Sbjct: 64  PAPSYGPPQTRPPPPPPPPQPTPP-APRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPP 122

Query: 581 XTXVPXRXXVSPXPXSX-PMXSPXPPQXTPPXXPXLXXXXXXSSPXXXRPXXSXSPPXHX 757
            T  P R    P P +  P  S  PPQ  PP  P          P    P  S  PP   
Sbjct: 123 QTP-PPRPPPQPTPSAPAPPPSYGPPQTPPPRPP--------PQPTPSAPAPSYGPPQPQ 173

Query: 758 XP 763
            P
Sbjct: 174 PP 175



 Score = 28.7 bits (61), Expect = 9.5
 Identities = 23/96 (23%), Positives = 27/96 (28%), Gaps = 3/96 (3%)
 Frame = +2

Query: 401 PAPXXAXXXXRXAPP-PLXXRLXXAFXPXIXXXXPXTXXXGXPXXPAXXXXXXXXXXXXP 577
           PAP  +    +  PP P       A  P      P       P  P+            P
Sbjct: 138 PAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQP 197

Query: 578 XXTXVPXRXXVSPXPXSXPMXSP--XPPQXTPPXXP 679
                P R    P P   P  +P   PP   PP  P
Sbjct: 198 KPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKP 233


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 32/122 (26%), Positives = 34/122 (27%), Gaps = 1/122 (0%)
 Frame = +2

Query: 401 PAPXXAXXXXRXAPPPLXXRLXXAFXPXIXXXXPXTXXXGXPXXPAXXXXXXXXXXXXPX 580
           PAP       R  PPP   +      P      P T     P  P             P 
Sbjct: 64  PAPSYGPPQTRPPPPPPPPQPTPP-APRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPP 122

Query: 581 XTXVPXRXXVSPXPXSX-PMXSPXPPQXTPPXXPXLXXXXXXSSPXXXRPXXSXSPPXHX 757
            T  P R    P P +  P  S  PPQ  PP  P          P    P  S  PP   
Sbjct: 123 QTP-PPRPPPQPTPSAPAPPPSYGPPQTPPPRPP--------PQPTPSAPAPSYGPPQPQ 173

Query: 758 XP 763
            P
Sbjct: 174 PP 175



 Score = 28.7 bits (61), Expect = 9.5
 Identities = 23/96 (23%), Positives = 27/96 (28%), Gaps = 3/96 (3%)
 Frame = +2

Query: 401 PAPXXAXXXXRXAPP-PLXXRLXXAFXPXIXXXXPXTXXXGXPXXPAXXXXXXXXXXXXP 577
           PAP  +    +  PP P       A  P      P       P  P+            P
Sbjct: 138 PAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQP 197

Query: 578 XXTXVPXRXXVSPXPXSXPMXSP--XPPQXTPPXXP 679
                P R    P P   P  +P   PP   PP  P
Sbjct: 198 KPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKP 233


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 231 HAPHHALCSHDHSGSGVRSQVLERLEMR 314
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 231 HAPHHALCSHDHSGSGVRSQVLERLEMR 314
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 231  HAPHHALCSHDHSGSGVRSQVLERLEMR 314
            H PHH    H H+G+G   Q  E+L+++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,411,356
Number of Sequences: 53049
Number of extensions: 237870
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)