Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_L24
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/55 (30%), Positives = 18/55 (32%)
 Frame = -1

Query: 814 GSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGGXRLXEXG 650
           G G   GGG   GG  G           A     G GC   G  G GG  +   G
Sbjct: 154 GCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSG 208



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXG 689
           G G G   GGG   G   G     P      G    G GC   G
Sbjct: 27  GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 70



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 84  GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXG-XXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G             G    G GC   G  G GG
Sbjct: 91  GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 141


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/55 (30%), Positives = 18/55 (32%)
 Frame = -1

Query: 814 GSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGGXRLXEXG 650
           G G   GGG   GG  G           A     G GC   G  G GG  +   G
Sbjct: 154 GCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSG 208



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXG 689
           G G G   GGG   G   G     P      G    G GC   G
Sbjct: 27  GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 70



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 84  GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXG-XXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G             G    G GC   G  G GG
Sbjct: 91  GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 141


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = -1

Query: 835 GXFXXGXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G    G G G   GGG   GG        P      G    G G    G  G GG
Sbjct: 30  GGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84



 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = -1

Query: 835 GXFXXGXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G    G G     GGG   GG  G     P      G    G G    G  G GG
Sbjct: 83  GGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/47 (31%), Positives = 15/47 (31%)
 Frame = -1

Query: 814 GSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXG 674
           G G   GGG   GG  G            G    G GC   G  G G
Sbjct: 62  GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/55 (30%), Positives = 17/55 (30%)
 Frame = -1

Query: 835 GXFXXGXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G    G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 128 GCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXG-XXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G G   GGG   GG  G             G    G GC   G  G GG
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 180


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
           protein R08B4.1b protein.
          Length = 1160

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/50 (32%), Positives = 17/50 (34%)
 Frame = -1

Query: 820 GXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G G+G   GGG   GG  G            G    G G    G  G GG
Sbjct: 791 GGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/55 (32%), Positives = 18/55 (32%)
 Frame = -1

Query: 835 GXFXXGXGSGXXXGGGXSXGGAXGXXXXXPXXXXXAGXXXXGXGCXXXGXLGXGG 671
           G F  G G G   GGG   GG  G            G    G G    G  G GG
Sbjct: 103 GDFGGGMGGGGYGGGGYG-GGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGG 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,940,465
Number of Sequences: 27780
Number of extensions: 91456
Number of successful extensions: 846
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)