Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_L22
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           32   0.72 
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    29   6.7  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 28/111 (25%), Positives = 30/111 (27%), Gaps = 4/111 (3%)
 Frame = +2

Query: 530 PLGGXPXXTXPXXQXGXXHPXXKHXXPXXXXPFGXGXXFXGTXXXXIXQXXPXLXXXXXP 709
           P  G P    P       H    H  P    P G G    GT         P       P
Sbjct: 278 PPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAG-AGTGAPPPPPAHPAAPAPPPP 336

Query: 710 SXSXXXXWAXX----PLXPXALSTRXXPXPXPXGPPXPXIXXXXGXXXXPP 850
           + S     A      P  P A +    P P P  PP P      G    PP
Sbjct: 337 APSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPP 387


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = +2

Query: 743 PLXPXALSTRXXPXPXPXGPPXPXIXXXXGXXXXPPXXXPP 865
           P+ P A S    P P P  P    I    G    PP   PP
Sbjct: 218 PVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPP 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,782,008
Number of Sequences: 37544
Number of extensions: 172420
Number of successful extensions: 493
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)