Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_L16
(814 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 33 0.048
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 32 0.084
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 30 0.34
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 29 0.59
SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|... 29 0.79
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 29 0.79
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 1.0
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 28 1.8
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 28 1.8
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 2.4
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 27 3.2
SPAC664.08c |||traub transciption factor family protein |Schizos... 27 3.2
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 27 3.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.2
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 27 3.2
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 4.2
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 5.5
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 5.5
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 26 5.5
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 26 7.3
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 26 7.3
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 26 7.3
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 26 7.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 7.3
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 25 9.7
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 33.1 bits (72), Expect = 0.048
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Frame = -1
Query: 331 SETTNNKREHEN--DPSID-EIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSI- 164
SE T+ HEN D S E ++T H+ P + S ED + + KD+ R + +
Sbjct: 645 SEATSPNTHHENLRDTSQKRESHSTPHDYEPHVSDKNDKSVEDKLHFVQKDESRPKEPVV 704
Query: 163 --------SSTYSALPPSGNDELTEEYQDEDNTDGGEYEDYSHAH 53
S A P N +EE Q N G + + H H
Sbjct: 705 DAAQKHEGRSETLAQPGQQNANQSEEKQGGQNGSNGGHHHHHHHH 749
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 32.3 bits (70), Expect = 0.084
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = -1
Query: 349 QPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDIT--KDDHRY 176
Q E K+ +TN E +++ AH + DS D DI+ +DD++
Sbjct: 22 QKEAAKNSSTNGSVNIEGTQDSNDLQYNAHLFKSSNPKEEYDSAIDVRNDISQDEDDYKR 81
Query: 175 TQSISSTYSALPP-SGNDELTEEYQDE 98
T ++ +Y + EL EY DE
Sbjct: 82 TNDVNDSYRLVRQYEAPKELLNEYADE 108
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 30.3 bits (65), Expect = 0.34
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -1
Query: 340 QNKSETTNNK-REHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSI 164
Q K + N R+ + P+++E ++ +S + P S + PV++ + D S
Sbjct: 113 QGKPRSYNELLRQASSAPAVNETSSSGLLQSKDKRSQSPHSPKKPVKNSSSRDQPVRNSG 172
Query: 163 SSTYSALPPSG 131
+++ ++LPP+G
Sbjct: 173 ATSTASLPPAG 183
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 29.5 bits (63), Expect = 0.59
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = -1
Query: 328 ETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSISSTYS 149
E N+ EN+ D YT A +P+ D P+ + D+ D H ISS+
Sbjct: 108 EKLNSSLSVENN---DSTYTDATLIAPKIGLDRPNINAITI-DV--DGHSLQNEISSSTD 161
Query: 148 ALPPSGNDELTEEYQD 101
L PS +D L E+ QD
Sbjct: 162 KLSPSQSDALFEQKQD 177
>SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 29.1 bits (62), Expect = 0.79
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = -1
Query: 364 APPIIQPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDD 185
A P++Q E++ E+++ E+ D + N+S Q T + S+ + I
Sbjct: 48 AGPLVQEEEDDMESSSYHATQEDIGDDDSRSESTRNRSSQHTGRVNFSSLGGLGSIFGGK 107
Query: 184 HRYTQSISSTYSALPPSGNDELTEEYQDEDNTD 86
++S + T + ++L EE Q++ D
Sbjct: 108 KSRSKSANGTQKKNANNNEEQLDEEEQNDPYLD 140
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 29.1 bits (62), Expect = 0.79
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Frame = -1
Query: 355 IIQPEQNKSETTNNKREHEND-------PSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDI 197
I+Q E+ K + +H+ND P + + + + +S Q + + S +D +
Sbjct: 592 IVQNEEEKESVEVEEGKHKNDLPKVSPKPPTEGVDSEVNGESLVQVNKVLKSEDDNTSEA 651
Query: 196 TKDDHRYTQSISSTYSALPPSGNDELTEEYQDEDNTDGGEYED 68
+KD + +S + + E+TEE N+ E ++
Sbjct: 652 SKDPSSHVKSPENIEKLKQNDDHFEVTEEITSTINSKISEKQE 694
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 28.7 bits (61), Expect = 1.0
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = -1
Query: 463 FDQETRVCERVDEVDCTKSEKFYSLNLELYGSTAPPIIQPEQNKSETTNNKREHENDPSI 284
F + ++ E +DE SE+ EL A ++ N + T+ R+ E
Sbjct: 117 FLEAHKILENLDEQTRKLSERTEKQQDEL--DIALDDLEETLNTLKRTSENRDREIARIS 174
Query: 283 DEIYTTAHNKSPQQTHDIPDSTEDPVQDITKD 188
++YT + PQ I S E+ +Q+++++
Sbjct: 175 QDVYTMSTITLPQSLEQIKKSQEEALQNLSRE 206
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 406 EKFYSLNLELYGSTAPPIIQPEQNKSETTNNKREHENDPSIDEIYTTAHNK 254
+K+ +L EL ST + + E +E +N+ H N+P+I +Y+ K
Sbjct: 601 QKYENLQEEL-SSTRKLLTKNEAAVAEQQSNEEMHSNEPNILNLYSVFEGK 650
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 343 EQNKSETTNNKREHENDPSIDEIYTTAHN 257
++N S +N K ++ PS++ +TTA+N
Sbjct: 1184 KENISSQSNRKADNNGTPSVNNSFTTANN 1212
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/81 (20%), Positives = 30/81 (37%)
Frame = -1
Query: 349 QPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQ 170
+PEQ K ++ + ++N P++ I P +D Q I++ H+ T
Sbjct: 112 EPEQQKKALSSKIKSNDNKPAVQSI----QRHGPDVAAPSSQPAKDQSQQISQGSHKRTI 167
Query: 169 SISSTYSALPPSGNDELTEEY 107
+ ND E Y
Sbjct: 168 NFVQQKDKRQKRSNDYQHENY 188
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 217 EDPVQDITKDDHRYTQSISSTYSALPPSGNDELTEEYQDEDNTDGGE 77
ED + +I+ + + T S P+ + EE+++ +TDG E
Sbjct: 610 EDEISEISSPSYS-SDDDRKTISETQPAPKQNINEEFENSTSTDGSE 655
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/75 (18%), Positives = 32/75 (42%)
Frame = -1
Query: 379 LYGSTAPPIIQPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQD 200
L ++ P + + + E +HEN S + + N+ Q+ IP+ D ++
Sbjct: 85 LNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEENEDDDQSSAIPEKDMDRLKK 144
Query: 199 ITKDDHRYTQSISST 155
I + + + I ++
Sbjct: 145 IINGEKKLSDQIRTS 159
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 364 APPIIQPEQNKSETTNNKREHENDPSIDEIYTTAHNK 254
+PPI+Q ++N S N+K E+ P + NK
Sbjct: 405 SPPILQNQENISSNDNSKSSPESSPPARKTTGKIENK 441
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -1
Query: 349 QPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTED 212
+P+ NK E T + + S++ ++T+ H K P+ +I S+ED
Sbjct: 103 RPKANKVEVT----DLPSSSSVEHLHTSKHLKGPRLPKNIIKSSED 144
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 68 LFACSFYHYQNSNNHYFKKK 9
LF CSFY Y S++ + KK
Sbjct: 44 LFQCSFYEYLQSDDEHLMKK 63
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 598 LRVPAKVIGGYYADLETSCQMFHVCTV 518
LR+P K G Y +S Q FHVC +
Sbjct: 272 LRIPEKWSPGKYDVFGSSHQWFHVCVI 298
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -1
Query: 358 PIIQPEQNKSETTNNKREHENDPSIDEIYTTAH 260
P++QP ++ T NN + ++P+I E + H
Sbjct: 160 PVVQPSVDEGTTQNNLQMGLDEPNIIEGFAEGH 192
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -1
Query: 259 NKSPQQTHDIPDSTEDPVQDITKDDHRYTQSISSTYSALPPSGNDELTEEYQDEDNTDGG 80
+ P+ D+ D T + + KD+ + S + P+ + E Y D+D+T+
Sbjct: 177 DNEPESQRDL-DETGNLAPEDLKDE------VKSVHEFNEPNDLRQQEESYSDDDDTNVN 229
Query: 79 EYED 68
E+ED
Sbjct: 230 EFED 233
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 337 NKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDD 185
++ T N I TTA K+P + D TED V D+ ++D
Sbjct: 774 SRPSTANGTSNQNTTSEITTSETTATEKTPSNSSD----TEDDVGDVVEND 820
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 292 PSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRY 176
PS+ ++ NKSP IP + D + DD Y
Sbjct: 168 PSMKDLALFHGNKSPSSKETIPKVSNSNSSDTSTDDQAY 206
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = -1
Query: 463 FDQETRVCERVDEVDCTKSEKFYSLNLELYGSTAPPIIQPEQNKSETTNNKREHENDPSI 284
F +ET +R + D + +K + E PP QP +N +N +H ++
Sbjct: 198 FQEETLQKQRFEREDESSRQKLSAAMNE----DIPPWRQPSKNSQTLSNGDLQHSKVQNV 253
Query: 283 DE---IYTTAHNKSPQQTHD 233
D+ T++ P+ +D
Sbjct: 254 DQKSGFLTSSETDVPKNIND 273
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.8 bits (54), Expect = 7.3
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = -1
Query: 373 GSTAPPIIQPEQNKSETTNNKREHENDPSI--DEIYTTAHNKSPQQTHDIPDSTEDPVQD 200
GS A I + +E + E+ ND +EI T +PQ ++ E QD
Sbjct: 339 GSEALDAILAQMGGTEKVEDVLENVNDTLARSEEIDATIQTYNPQNIDLEDEAVEKEWQD 398
Query: 199 ITKDDHRYTQSISSTYSALPPSGNDELTEEYQDED 95
+ ++ + +S+ + + +D T D D
Sbjct: 399 LVAEEQKVEDIVSTLGNVSLKTPSDTFTLTNTDSD 433
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 7.3
Identities = 22/96 (22%), Positives = 36/96 (37%)
Frame = -1
Query: 352 IQPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYT 173
+ P+ + T+ E E DE NKS + DIP + +++IT R
Sbjct: 8 LSPKVTHEQQTDIDSECEITEVDDE--NVNENKSQEMIQDIPARDREEIENIT----RTF 61
Query: 172 QSISSTYSALPPSGNDELTEEYQDEDNTDGGEYEDY 65
+ Y + G + Y+ ED G D+
Sbjct: 62 VELQENYRLIEKIGEGTFSSVYKAEDLHYGRYINDW 97
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 349 QPEQNKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDD 185
+P +++ E + + + +D DE++ SP TH+ ED + KDD
Sbjct: 352 KPGKSQGEISEQEEDEYDDAESDEMH------SPYSTHEPESEPEDQDEPSEKDD 400
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/92 (17%), Positives = 35/92 (38%)
Frame = -1
Query: 337 NKSETTNNKREHENDPSIDEIYTTAHNKSPQQTHDIPDSTEDPVQDITKDDHRYTQSISS 158
+ S ++ ++ E++ S + S + + S++ + +KD + S S
Sbjct: 220 SSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDS 279
Query: 157 TYSALPPSGNDELTEEYQDEDNTDGGEYEDYS 62
+ S + E +D D+T D S
Sbjct: 280 EDDSSSDSSDSESESSSEDSDSTSSSSDSDSS 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,031,305
Number of Sequences: 5004
Number of extensions: 64794
Number of successful extensions: 289
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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