Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_L15
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 51 1e-06
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 46 3e-05
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 42 4e-04
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 40 0.003
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 31 1.4
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 31 1.4
04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497... 30 2.4
04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083... 29 3.1
09_01_0039 - 687711-688607,692336-693113,693414-693501,693761-69... 29 4.1
04_01_0418 - 5531652-5531827,5535111-5535195,5535250-5535402,553... 28 7.2
03_02_0428 - 8375623-8375882,8375965-8376168,8376260-8376497,837... 28 9.6
01_06_0080 + 26246857-26247459 28 9.6
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 50.8 bits (116), Expect = 1e-06
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Frame = -3
Query: 583 HHGRGKVDIVD--KYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSE 410
H+G V IVD K ++ D +F+ G + ++ DD E L
Sbjct: 208 HNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAP--IGKKAICDDDVVLETTAPK---LYS 262
Query: 409 VSDATGKIKVTPLAKPFKQENLSPQNAYILDTISGNIYVWIGKQSTANEKSQAMTKAQEL 230
+++ K++ T L K + N +++D S ++++W+G+ + E+ A +E
Sbjct: 263 INNGQLKLEDTVLTKSILENN----KCFLVDCGS-DLFIWVGRLTQVEERKAASAAVEEF 317
Query: 229 LNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 137
+ +N P +VTRV+Q E FK F +W
Sbjct: 318 IATQNRPKTTRVTRVIQGYENHTFKSKFESW 348
Score = 48.0 bits (109), Expect = 8e-06
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = -3
Query: 466 GGDDQEFERNEASNVI----LSEVSDATGKIKVTPLAKPFKQENLSPQNAYILDTISGNI 299
GG RN +V+ L S GK++VT + F Q++L ++ +LDT G +
Sbjct: 638 GGKQNYTSRNATHDVVREPHLYTFSLRNGKLEVTEIFN-FSQDDLLTEDMMVLDT-HGEV 695
Query: 298 YVWIGKQSTANEKSQAMTKAQELL-NAKNYPSW---VQVTRVLQNTEPAAFKQYFFTW 137
+VW+G+ A EK +A Q+ +A + S V + +V++ EP F+ Y F+W
Sbjct: 696 FVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYKVVEGNEPCFFRTY-FSW 752
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -1
Query: 771 MFQVKGKRDVRVRQVDPQIASMNKGDCFVXDLDNDIYVFVGEKAKNVEKLKAI 613
++ KGKR +RV++V +S+N D F+ D + IY F G + E+ KA+
Sbjct: 145 LYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKAL 197
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 394 GKIKVTPLAKPFKQENLSPQNAYILDTISGNIYVWIGKQSTANEKSQAMTKAQEL 230
GK + PF + +L+ + +ILDT IY + G S E+++A+ Q L
Sbjct: 150 GKRAIRVKEVPFARSSLNHDDVFILDT-EKKIYQFNGANSNIQERAKALEAIQHL 203
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = -3
Query: 355 QENLSPQNAYILDTISGNIYVWIGKQSTANEKSQAMTKAQELLNAKNYPSWVQVTRVLQN 176
+E L Y+LD S IYVW+G+++ E+ +A + A+ELL N P + R+++
Sbjct: 333 RELLDSTKCYLLDCGS-EIYVWMGRETPLEERKRAGSAAEELLREVNRPK-SHIVRLMEG 390
Query: 175 TEPAAFKQYFFTW 137
E F+ F W
Sbjct: 391 FETVIFRSKFSKW 403
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 771 MFQVKGKRDVRVRQVDPQIASMNKGDCFVXDLDNDIYVFVGEKAKNVEKLKAISFANQVR 592
+F +GK V V++V +S+N D F+ D + I+ F G + E+ KA+ ++
Sbjct: 200 LFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYLK 259
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -3
Query: 487 LVPDESTGGDDQEFERNEASN-VILSEVSDATGKIKVTPLAKPFKQENLSPQNAYILDTI 311
++P+E GG F E + ++ + GK V PF + +L+ + +ILDT
Sbjct: 175 IIPEE--GGIASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTK 232
Query: 310 SGNIYVWIGKQSTANEKSQAMTKAQELLNAKN 215
S I+ + G S+ E+++A+ Q L ++ +
Sbjct: 233 S-KIFQFNGSNSSIQERAKALEVVQYLKDSNH 263
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = -3
Query: 394 GKIKVTPLAKPFKQENLSPQNAYILDTISGNIYVWIGKQSTANEKSQAMTKAQELLN--- 224
G +K+ + F Q++L ++ +ILD S +I+VW+G+Q + QA+ ++ +
Sbjct: 633 GNLKIKEIYH-FTQDDLMTEDVFILDCHS-DIFVWVGQQVDVKVRLQALDIGEKFVKLDF 690
Query: 223 -AKNYPSWVQVTRVLQNTEPAAFKQYFFTW 137
+N S + +++ +EP F + FFTW
Sbjct: 691 LMENLSSDTPIFVIMEGSEPTFFTR-FFTW 719
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = -3
Query: 361 FKQENLSPQNAYILDTISGNIYVWIGKQSTANEKSQAMTKAQELL----NAKNYPSWVQV 194
F Q++L ++ ++LD + +++VW+G++ A +SQAM ++ L +N +
Sbjct: 622 FTQDDLMAEDIFVLDCRT-DLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQDTPI 680
Query: 193 TRVLQNTEPAAFKQYFFTW 137
V + +EP F + FFTW
Sbjct: 681 FIVTEGSEPQFFTR-FFTW 698
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 771 MFQVKGKRDVRVRQVDPQIASMNKGDCFVXDLDNDIYVFVGEKAKNVEKLKAISFANQVR 592
++ +GK V V++V +S+N D F+ D N I+ F G + E+ KA+ ++
Sbjct: 161 LYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVVQYIK 220
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -3
Query: 589 QDHHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTG---GDDQEFERNEAS 428
Q HG V + Y D D ++F GSG +DL ++ T DQ+FE+ A+
Sbjct: 116 QSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAA 172
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -3
Query: 589 QDHHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGD---DQEFERNEAS 428
Q HG V + Y D D ++F GSG +DL ++ T + DQ+FE+ A+
Sbjct: 305 QSTHGAQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTSKEQSFDQKFEKLNAA 361
>04_04_0924 -
29449285-29449290,29449386-29449575,29449669-29449772,
29449845-29449976,29450064-29450162,29450439-29450451,
29450688-29450719,29450802-29450921,29450992-29451105,
29451192-29451325,29454014-29454251
Length = 393
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -3
Query: 583 HHGRGKVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVS 404
H R KV+I + +SD D V DES+ DQ FE N+ + E
Sbjct: 83 HRKRSKVNISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKE-- 140
Query: 403 DATGKIKVTPLAKPFKQENLSPQNAYILDTI 311
+ K+K+ +PF ++ ++ D+I
Sbjct: 141 EHMKKLKIKLGKRPFTDDHKKKRHKVESDSI 171
>04_04_0464 -
25405629-25405665,25406644-25406710,25408112-25408373,
25408989-25409198,25409818-25410006,25410087-25410548,
25410889-25410936,25411972-25412301
Length = 534
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 404 RRHGKDQSDATSEAFQARELESTKRVYFGHHIWQHLRLDREAVYR 270
R H D + E+ + R LE+ +R Y W+ L+ D + R
Sbjct: 22 RNHEDDDDEEEEESGEGRVLEAWERAYADDRSWEALQEDESGLLR 66
>09_01_0039 -
687711-688607,692336-693113,693414-693501,693761-694148,
694176-694401,694527-694680,695073-695145
Length = 867
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 765 QVKGKRDVRVRQVDPQIASMNKGDCFVXDLDNDIYVFVGEK-AKNVEKLKAISFANQVRI 589
++ G+ RVR+VD + N+ DCF +D + + K + V K+KA N R
Sbjct: 33 ELYGRSFGRVREVDVEADGCNRHDCFRILVDLPVAKPLKSKIGQKVNKVKATYQPNASRK 92
Query: 588 RIITDAEKSILWTSTR 541
+ A ++ +S R
Sbjct: 93 LVFRSAGSAVSSSSRR 108
>04_01_0418 -
5531652-5531827,5535111-5535195,5535250-5535402,
5535516-5535632,5536136-5536363
Length = 252
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -1
Query: 765 QVKGKRDVRVRQVDPQIASMNKGDCFVXDLDNDIYVFVGEKAKNVEKLKAISFANQVRIR 586
+VKG++D R QI + GDC++ + + E +N L +S N+++ R
Sbjct: 125 KVKGEKDEVYRGASTQILGVAVGDCYIMSTSGNDAGMLLEGVRNNNGL--VSLNNELKTR 182
Query: 585 I 583
+
Sbjct: 183 L 183
>03_02_0428 -
8375623-8375882,8375965-8376168,8376260-8376497,
8376606-8376755,8376842-8377066
Length = 358
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 777 RTMFQVKGKRDVRVRQVDPQIASMNKGDCFVXDLDNDIYVF-VGEKAKNVEKLK 619
+T F + G RD+ + + P I +CF D+ I+V + E+AK E+ K
Sbjct: 294 QTHFYIDGPRDIEISSLYPDIPFRTIDECF----DDYIHVLNLAEEAKEEEEKK 343
>01_06_0080 + 26246857-26247459
Length = 200
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 644 KLRTLRSLKQFRSPIKYGSGSSRTRKSRYCGQVLERCGRSE 522
+LR LRS + RS I+ S + R CG V GRSE
Sbjct: 158 RLRPLRSGRWGRSRIRQRLEKSAPARMRRCGAVPIHAGRSE 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,117,237
Number of Sequences: 37544
Number of extensions: 347803
Number of successful extensions: 1152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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