Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_L13
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.4  
12_02_1219 + 27096477-27096590,27096704-27097078                       29   3.3  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    29   3.3  
07_03_0177 - 14770777-14772045                                         29   4.4  
06_01_0486 - 3455030-3455770                                           28   7.7  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/74 (25%), Positives = 20/74 (27%), Gaps = 3/74 (4%)
 Frame = +3

Query: 495 PXPXXXVXXXPGPXAPAXXPXXXXPXXXPXXP---GXPPPLXXXGFXXKXSXPXGPXXXX 665
           P P       P P  P   P    P   P  P     PPPL    +      P  P    
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594

Query: 666 PFXXAXXXXPXPXP 707
           P        P P P
Sbjct: 595 PNCLVPSPPPPPPP 608


>12_02_1219 + 27096477-27096590,27096704-27097078
          Length = 162

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
 Frame = -2

Query: 604 GGGXPGXXGXXXGXXXXGXXAGAXGPGXXXTXXXGF-GXQSXXXGRGXXSXXXGXVGXRX 428
           GGG  G  G   G    G   G  G G       G+ G      GRG      G  G R 
Sbjct: 93  GGGGYGQRGGGGGYGGGGGYGGGGGGGYGQRREGGYGGGGGYGGGRGGGGGYGGGYGSRG 152

Query: 427 XG 422
            G
Sbjct: 153 GG 154


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/83 (25%), Positives = 24/83 (28%)
 Frame = +3

Query: 423 PXXRCPTXPXXXDXXPRPXXXD*XPXPXXXVXXXPGPXAPAXXPXXXXPXXXPXXPGXPP 602
           P    PT P        P      P P   +   P P   +  P    P   P  P  PP
Sbjct: 65  PTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPA-PP 123

Query: 603 PLXXXGFXXKXSXPXGPXXXXPF 671
           P     F    + P  P    PF
Sbjct: 124 PTPTPKFPSSSANP-SPPDAYPF 145


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/71 (28%), Positives = 20/71 (28%)
 Frame = -2

Query: 706 GXGXGXXXXAXXKGXXXXGPXGXEXFXXKPXXXRGGGXPGXXGXXXGXXXXGXXAGAXGP 527
           G G G        G    G  G   F        GGG  G  G   G    G   G  G 
Sbjct: 60  GYGKGGGFGGGGGGGGGGGFGGGGGFGGGGGGGLGGGGGGGLGGGGGFGKGGGVGGGFGK 119

Query: 526 GXXXTXXXGFG 494
           G       GFG
Sbjct: 120 GGGFGKGGGFG 130


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
 Frame = +3

Query: 423 PXXRCPTX-PXXXDXXPRPXXXD*X-PXPXXXVXXXPGPXAPAXXPXXXXPXXXPXXPGX 596
           P  RCP+  P      PRP       P P   V     P  P   P    P   P  P  
Sbjct: 68  PSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPP 127

Query: 597 PPP 605
            PP
Sbjct: 128 TPP 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,468,751
Number of Sequences: 37544
Number of extensions: 187368
Number of successful extensions: 893
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)