Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_L13
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 33 0.93
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 33 0.93
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 33 0.93
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 30 8.7
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 30 8.7
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 30 8.7
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 30 8.7
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 30 8.7
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.93
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 495 PXPXXXVXXXPGPXAPAXXPXXXXPXXXPXXPGXPPPLXXXGFXXKXS-XPXGPXXXXPF 671
P P + PGP P P P P G PPP GF + P P P
Sbjct: 300 PPPAPPLGSPPGPK-PGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPH 358
Query: 672 XXAXXXXPXPXP 707
P P P
Sbjct: 359 PDFAAPPPPPPP 370
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.93
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 495 PXPXXXVXXXPGPXAPAXXPXXXXPXXXPXXPGXPPPLXXXGFXXKXS-XPXGPXXXXPF 671
P P + PGP P P P P G PPP GF + P P P
Sbjct: 300 PPPAPPLGSPPGPK-PGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPH 358
Query: 672 XXAXXXXPXPXP 707
P P P
Sbjct: 359 PDFAAPPPPPPP 370
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.93
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 495 PXPXXXVXXXPGPXAPAXXPXXXXPXXXPXXPGXPPPLXXXGFXXKXS-XPXGPXXXXPF 671
P P + PGP P P P P G PPP GF + P P P
Sbjct: 300 PPPAPPLGSPPGPK-PGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPH 358
Query: 672 XXAXXXXPXPXP 707
P P P
Sbjct: 359 PDFAAPPPPPPP 370
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/100 (24%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +3
Query: 423 PXXRCPTXPXXXDXXPRPXXXD*XPXPXXXVXXXPG--PXAPAXXPXXXXPXXXPXXPGX 596
P + P P PRP + P P P P PA P P PG
Sbjct: 228 PGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGV 287
Query: 597 PPPLXXXGFXXKXSXPXGPXXXXPFXXAXXXXPXPXPXLS 716
PP P P P P P S
Sbjct: 288 HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTS 327
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/100 (24%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +3
Query: 423 PXXRCPTXPXXXDXXPRPXXXD*XPXPXXXVXXXPG--PXAPAXXPXXXXPXXXPXXPGX 596
P + P P PRP + P P P P PA P P PG
Sbjct: 228 PGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGV 287
Query: 597 PPPLXXXGFXXKXSXPXGPXXXXPFXXAXXXXPXPXPXLS 716
PP P P P P P S
Sbjct: 288 HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTS 327
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/100 (24%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +3
Query: 423 PXXRCPTXPXXXDXXPRPXXXD*XPXPXXXVXXXPG--PXAPAXXPXXXXPXXXPXXPGX 596
P + P P PRP + P P P P PA P P PG
Sbjct: 228 PGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGV 287
Query: 597 PPPLXXXGFXXKXSXPXGPXXXXPFXXAXXXXPXPXPXLS 716
PP P P P P P S
Sbjct: 288 HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTS 327
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/100 (24%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +3
Query: 423 PXXRCPTXPXXXDXXPRPXXXD*XPXPXXXVXXXPG--PXAPAXXPXXXXPXXXPXXPGX 596
P + P P PRP + P P P P PA P P PG
Sbjct: 228 PGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGV 287
Query: 597 PPPLXXXGFXXKXSXPXGPXXXXPFXXAXXXXPXPXPXLS 716
PP P P P P P S
Sbjct: 288 HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTS 327
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/100 (24%), Positives = 26/100 (26%), Gaps = 2/100 (2%)
Frame = +3
Query: 423 PXXRCPTXPXXXDXXPRPXXXD*XPXPXXXVXXXPG--PXAPAXXPXXXXPXXXPXXPGX 596
P + P P PRP + P P P P PA P P PG
Sbjct: 228 PGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGV 287
Query: 597 PPPLXXXGFXXKXSXPXGPXXXXPFXXAXXXXPXPXPXLS 716
PP P P P P P S
Sbjct: 288 HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTS 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,392,193
Number of Sequences: 237096
Number of extensions: 962917
Number of successful extensions: 4092
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3958
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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