Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_L10
(832 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 239 9e-63
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 239 9e-63
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 239 9e-63
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 239 9e-63
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 239 9e-63
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 239 9e-63
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 237 4e-62
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 239 bits (585), Expect = 9e-63
Identities = 103/152 (67%), Positives = 133/152 (87%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRRV+ PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRVVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 239 bits (585), Expect = 9e-63
Identities = 103/152 (67%), Positives = 133/152 (87%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRRV+ PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRVVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 239 bits (585), Expect = 9e-63
Identities = 103/152 (67%), Positives = 133/152 (87%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRRV+ PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRVVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 239 bits (585), Expect = 9e-63
Identities = 103/152 (67%), Positives = 133/152 (87%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRRV+ PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRVVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 239 bits (585), Expect = 9e-63
Identities = 103/152 (67%), Positives = 133/152 (87%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRRV+ PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRVVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 239 bits (585), Expect = 9e-63
Identities = 103/152 (67%), Positives = 133/152 (87%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRRV+ PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRVVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 237 bits (580), Expect = 4e-62
Identities = 102/152 (67%), Positives = 132/152 (86%)
Frame = -2
Query: 711 LHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWV 532
LH+A+E ++++ LE L G FQRPPLI+AVKRQLRVRT+Y+SK++++D ++ +G+FWV
Sbjct: 159 LHNAIEGGTQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWV 218
Query: 531 SCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENHKD 352
SCEAG+YIRT+CVHLGL+LGVGGQM ELRRVRSG+ EK+ MVTMHD+LDAQW Y+NHKD
Sbjct: 219 SCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKD 278
Query: 351 ETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
E+YLRR + PLE LL +HKR+ +KDSAVNA+C
Sbjct: 279 ESYLRRFVYPLEKLLTSHKRLVMKDSAVNAIC 310
Score = 97.1 bits (231), Expect = 7e-20
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = -1
Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEK 14
KGEA+ +A+ALMTT+ +S+CDHG+ AK+KRVIMERDTYPRKWGLGPKASQ+K
Sbjct: 339 KGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKK 390
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -3
Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
K + K + + GAK++LPG+LRYEDGIEV+QEIV++T
Sbjct: 297 KRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVIT 337
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,339,238
Number of Sequences: 237096
Number of extensions: 2124948
Number of successful extensions: 4262
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4262
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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