Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_L10
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   210   1e-54
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr...    28   9.4  
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    28   9.4  
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  210 bits (512), Expect = 1e-54
 Identities = 93/154 (60%), Positives = 121/154 (78%)
 Frame = -2

Query: 717 FXLHSAVENIQKVTQGLEKLRGXXFQRPPLISAVKRQLRVRTVYDSKLLDFDQDKNIGVF 538
           F LH  VE+ +KV Q LEKL G  FQRPPLISAVKRQLR+RTVY++K +++D  + +G+F
Sbjct: 145 FKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKRQLRIRTVYENKFIEYDPAQQMGIF 204

Query: 537 WVSCEAGSYIRTMCVHLGLMLGVGGQMIELRRVRSGIQGEKEGMVTMHDILDAQWSYENH 358
              CE+G+Y+RT+CVHLGL+LG GGQM ELRR RSGI  E E MVTMHD+LDAQ+  +  
Sbjct: 205 NCICESGTYVRTICVHLGLILGCGGQMQELRRNRSGICDENENMVTMHDVLDAQYLLDTQ 264

Query: 357 KDETYLRRVIKPLEGLLIAHKRIFIKDSAVNAVC 256
           KDE+Y+R +++PLE LL  HKR+ +KDS +NA+C
Sbjct: 265 KDESYMRHIVRPLEALLTQHKRVVVKDSCINAIC 298



 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = -1

Query: 169 KGEAVALAVALMTTSTMSSCDHGVAAKLKRVIMERDTYPRKWGLGPKASQEKKKKK 2
           KGEA+ +A+A M TST++S DHGV AK KRVIMERD Y RKWGLGP AS++K+  K
Sbjct: 327 KGEAICIAIAQMNTSTIASVDHGVVAKSKRVIMERDVYGRKWGLGPVASKKKQMVK 382



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -3

Query: 296 KGYLSKTALLMLFAXGAKVLLPGILRYEDGIEVDQEIVIVT 174
           K  + K + +     GAK+L+PGILRY+D IEV +EIVI++
Sbjct: 285 KRVVVKDSCINAICYGAKILIPGILRYDDDIEVGKEIVIMS 325


>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
            R07G3.3c protein.
          Length = 1316

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 424  GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 308
            G  GR G D +  R    +   +R D  SSSN+T+   P
Sbjct: 1237 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1275


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
            R07G3.3a protein.
          Length = 1982

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 424  GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 308
            G  GR G D +  R    +   +R D  SSSN+T+   P
Sbjct: 1903 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1941


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
            R07G3.3b protein.
          Length = 1987

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 424  GREGRHGHDARHPRCTMVV*KPQRRDLSSSSNQTSGRPP 308
            G  GR G D +  R    +   +R D  SSSN+T+   P
Sbjct: 1908 GSSGRMGQDVQRVRLPTGLRDAEREDQCSSSNETNDERP 1946


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,373,305
Number of Sequences: 27780
Number of extensions: 343081
Number of successful extensions: 773
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)