Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_L09
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.076
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 34 0.13
AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical ... 31 0.71
Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical pr... 30 2.2
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.8
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.8
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 29 3.8
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 5.0
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41992-9|AAK93854.1| 294|Caenorhabditis elegans Hypothetical pr... 28 6.6
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.076
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = -2
Query: 667 KLSLRNK---VTLYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRFCR 530
K S NK + LYKT IRP + Y +VV + +++ K+++ +Q+ F R
Sbjct: 211 KYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -2
Query: 646 VTLYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRFCR 530
+ LYKT IRP + Y +VV + +++ K+++ +Q+ F R
Sbjct: 191 ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical
protein Y39E4B.2 protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 572 GAGCVSEHYACIRHDGAYTSFVESYLITEGQFXFDYKAL 688
GA C++ YA IR D SF+ +YL E FDYK +
Sbjct: 5 GASCLTPVYAGIRDD--LNSFLRAYLQFESVRFFDYKVM 41
>Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical
protein C49A1.1 protein.
Length = 246
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -2
Query: 574 TNLKSLQVIQSRFCRIAVGAPWFLRNVDL---HDDLELDSFSKYLQSASLRHFEKAARHE 404
TN++ + ++ R G W+LRN + H+D + + + ++ +K + E
Sbjct: 107 TNVQCIYFVEDGKKRRMAGVTWYLRNDEKSKNHEDYNMIAIYETIREKRFEEVQKIRKLE 166
Query: 403 NPLIVAAGNYIPDPVD 356
+ G ++ +P D
Sbjct: 167 KEEALRRGGWLGEPTD 182
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 487 HDDLELDSFSKYLQSASLRHFEKAARHENPLIVAAGNYI 371
H D E ++ ++ + S RH ++ E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 487 HDDLELDSFSKYLQSASLRHFEKAARHENPLIVAAGNYI 371
H D E ++ ++ + S RH ++ E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 350 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 171
G+ S+ K RH G S S + HH H+ + LAT + + +P + +P L
Sbjct: 944 GRASSEKKKRHVGGSSS--SSQHHHHHQQQQTPLLRLATPLTPEPSSGTVTPRAITPSPL 1001
Query: 170 SGS 162
S S
Sbjct: 1002 SSS 1004
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 475 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 308
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 3753 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 3807
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 475 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 308
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 4707 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 4761
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 475 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 308
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 5610 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 5664
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 475 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 308
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 6513 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 6567
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 475 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 308
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 7416 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 7470
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.6
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Frame = -2
Query: 676 VEAKLSLRNKVTLYKTCIRPVMTYASV--VFAHAARTNLKSLQVIQSRFCRIAVGAPWFL 503
+E + K+ +++ P++ + V A R N + + V+ + F P+F
Sbjct: 133 LEKAIKPNTKMVWFESPSNPLLKVVDIAAVVQTAKRANPEIVVVVDNTFM-----TPYFQ 187
Query: 502 RNVDLHDDLELDSFSKY-------LQSASLRHFEKAARHENPLIVAAGNYIPDPVD-RMV 347
R + L D+ + S +KY + A++ + ++ +H + + A G +P P D +V
Sbjct: 188 RPLSLGADIAVHSITKYINGHSDIIMGAAITNNDEFQQHLHFMQRAIGG-VPSPFDCFLV 246
Query: 346 NRRRRPKHV 320
NR + HV
Sbjct: 247 NRGLKTLHV 255
>U41992-9|AAK93854.1| 294|Caenorhabditis elegans Hypothetical
protein F32E10.7 protein.
Length = 294
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 224 TSELTHRHSPLSFS--PDLLSGSRFRXRW*ILRSTALARVSVSNSPVEPRELTY*R*GEA 51
+ E+ HR+S + P+ + + R ++ + S SP+ PR++ R
Sbjct: 93 SQEIDHRYSLIQMDSIPENMVTNEMEERLATTQNEDIIPESSQRSPITPRKIHEKRASIT 152
Query: 50 EIASQGYQHR*EKKK 6
E+ ++ +HR +K K
Sbjct: 153 EVTTENLRHRFQKMK 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,982,926
Number of Sequences: 27780
Number of extensions: 365437
Number of successful extensions: 968
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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