Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_L03
         (778 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0516 + 4354494-4354575,4354621-4354832                           28   7.2  
05_02_0124 + 6849034-6851502                                           28   9.5  

>05_01_0516 + 4354494-4354575,4354621-4354832
          Length = 97

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 362 GAPPASPSRLDTDICHNIEMNAETAASGGLVAG 460
           G P A  S  +T++ + I    E   SGGLVAG
Sbjct: 16  GLPAAVTSDRETEVLNKILWTGERRQSGGLVAG 48


>05_02_0124 + 6849034-6851502
          Length = 822

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 558 GTLPRELPPRHGPGSAPHWTEPSHPTLL 641
           G LPR+ PP   P S P+ T P +P  L
Sbjct: 10  GKLPRQPPPPPPPPSPPNSTFPRYPKSL 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,608,928
Number of Sequences: 37544
Number of extensions: 230379
Number of successful extensions: 773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)