Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_K18
(774 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0517 + 25841292-25842099,25842256-25842308 32 0.44
10_01_0130 + 1540412-1541173 31 0.77
02_05_1308 + 35601314-35601390,35602486-35602566,35603513-356040... 31 1.0
01_06_1132 - 34769800-34769955,34770098-34770157,34770259-347703... 30 1.8
03_01_0640 - 4683970-4684481,4685197-4685343,4685606-4686764,468... 30 2.3
04_03_0547 - 17032318-17032392,17032893-17032962,17032979-170331... 29 3.1
02_04_0413 + 22681957-22682035,22682253-22682788 29 3.1
09_02_0159 + 5105272-5106360,5107605-5107769 29 4.1
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148... 29 4.1
02_05_0011 + 24953472-24954506 29 4.1
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355... 29 5.4
05_07_0290 + 29016410-29018920 29 5.4
05_01_0159 - 1079089-1079091,1079312-1079572 29 5.4
03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302... 29 5.4
09_03_0088 - 12242020-12242941,12243467-12243550,12243591-12244438 28 7.2
06_01_0499 - 3581145-3582425 28 7.2
06_01_0495 - 3546131-3547588 28 7.2
05_03_0509 + 14858250-14858545,14859139-14859243,14859345-14859912 28 7.2
05_01_0591 + 5308735-5309178,5309265-5310314 28 7.2
04_04_0126 + 22952577-22952871,22952912-22953519,22954125-229545... 28 7.2
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933... 28 9.5
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 235 RPVLDDWLRRRHGXPVV*GDTGAVGARLLRQVPVPHRQG 119
RP + DW+R R G PV D AV A++ + + HR+G
Sbjct: 93 RPDILDWVRLRCGKPVPEPDATAVVAQIAEALALCHRRG 131
>10_01_0130 + 1540412-1541173
Length = 253
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 41 PPPTRRACVAPCPPRQWTQWR-HRASGSLSMRH 136
PPP RR AP PPRQ +Q R R G +RH
Sbjct: 157 PPPPRRQSPAPPPPRQHSQRRATRDYGEEHVRH 189
>02_05_1308 +
35601314-35601390,35602486-35602566,35603513-35604064,
35604998-35605408,35606830-35607544
Length = 611
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 183 RVTQVLSGHGCFAKYQCRIDREPDARCLHCVHXRGGHGATHARRVGGGSPRG 28
++ ++L HG K+ DR+ + C GG GAT+A R GGG G
Sbjct: 221 KIQRLLPPHGITVKHIS--DRDTEIARFFCF-CSGGGGATYAHRQGGGGSSG 269
>01_06_1132 -
34769800-34769955,34770098-34770157,34770259-34770334,
34770412-34770533,34770634-34770708,34770899-34771025,
34771126-34771214,34773479-34773535,34773584-34773661
Length = 279
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 526 CRSLFSGKTY*ALTSLAFDQVTAPFPLSLKW-LATLGQVCKTHSRHYIDG 380
C +L SGK + + + F + T PF ++L+W L G+ KTH+ + +G
Sbjct: 154 CLALLSGKAHMYILMVLFTEATTPF-VNLRWYLEVAGK--KTHNLYLYNG 200
>03_01_0640 -
4683970-4684481,4685197-4685343,4685606-4686764,
4686851-4686907
Length = 624
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/79 (30%), Positives = 31/79 (39%)
Frame = +3
Query: 75 VLPXSGRSGGTERPAPCLCGTGTWRSNRAPTAPVSP*TTGXPCLLLSQSSSTGRIASNGC 254
V P R + A G G W S R PT P S + P S + GR +G
Sbjct: 548 VRPQRAREAAKDSVAKAALGNGGWSSRRRPT-PSSRRLSQSPG---SSVKNRGRDNGSGS 603
Query: 255 EAGGRAQKPLPPFRHQGLT 311
G R++ P HQG +
Sbjct: 604 HRGSRSRSKSRP--HQGFS 620
>04_03_0547 -
17032318-17032392,17032893-17032962,17032979-17033103,
17033196-17033252,17034152-17034217
Length = 130
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = -2
Query: 488 YKSGFRPGHSTVSALLKVVGDIRAGMQDTLASLYRWRE 375
Y++G+ P +S L +V G+I+ +++ +A W++
Sbjct: 24 YEAGWEPTGDAISPLDQVTGEIQHNLEEHIAQTQEWQQ 61
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 123 CLCGTGTWRSNRAPTAPVSP*TTGXPCLLLSQSSSTGRIASNGCEAGGRAQKPLPP 290
C CG G P P + PC+ S NGC GG PP
Sbjct: 76 CCCGAGCSEQCAECPRPPHPPPSPSPCVHPPCCESAAGCCCNGCSGGGCGGGQCPP 131
>09_02_0159 + 5105272-5106360,5107605-5107769
Length = 417
Score = 29.1 bits (62), Expect = 4.1
Identities = 32/102 (31%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Frame = +3
Query: 12 FFRGEILVDYLRPLGERVLRRVLPXSGRSGGT--ERPAPCLCGTGTWRSNRAPTAPVSP* 185
FFR ILVD RPL + ++ RS ER LCGT + A
Sbjct: 177 FFRARILVDVTRPLVASIDVKLEDGECRSISVEYERVGSILCGTCRILGHSADRCSTGNQ 236
Query: 186 TTGXP--CLLLSQSSSTGRIASNG-----CEAGGRAQKPLPP 290
P LS+SS+ R G AG PLPP
Sbjct: 237 RPSIPRNRSRLSRSSTVNRDDGGGSVGSSSSAGSGISPPLPP 278
>03_05_0377 +
23613181-23613342,23614469-23614501,23614606-23614879,
23615105-23615585,23616174-23616846
Length = 540
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 68 APCPPRQWTQWRHRASGSLSMRHWYLAK-QPCP 163
+PCP W +W+ + G W LA + CP
Sbjct: 261 SPCPCAIWEKWKAKGHGDSDSVKWILANTKSCP 293
>02_05_0011 + 24953472-24954506
Length = 344
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 232 PVLDDWLRRRHGXPVV*GDTGAVGARLLRQVPVPHRQG 119
P L DW+R R G PV AV A+L + HR+G
Sbjct: 107 PDLLDWIRLRRGAPVPEPVAAAVVAQLAEALAHCHRRG 144
>06_01_0497 +
3555919-3557154,3557815-3558143,3558177-3558775,
3558919-3560393
Length = 1212
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 567 LPIKGDRRLCTQT-IVAVYFPEKLIEPLQVWLSTRSQHRFRSP*SGWR 427
LP+ RR T A PE +IE + + L +S RFRS WR
Sbjct: 749 LPVAKRRRCVEPTGAAAACIPEDVIEQILLRLPVKSILRFRSVCKSWR 796
>05_07_0290 + 29016410-29018920
Length = 836
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -2
Query: 494 SPYKSGFRPGHSTVSALLKVV---GDIRAGMQDTLASLYRWREEERARGSRLVQQQIALR 324
S K G RP +TVS+LLK V G +R GM+ L E + G+ LV
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 323 REELRQALVAEWRQRLL 273
R + Q ++ R L
Sbjct: 342 RLDCAQKVLDALEHRNL 358
>05_01_0159 - 1079089-1079091,1079312-1079572
Length = 87
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 48 GGGSPRGFPPEKKKKK 1
GGG PRG PE KKKK
Sbjct: 55 GGGFPRGSEPELKKKK 70
>03_05_0379 +
23628200-23628366,23629074-23629133,23630177-23630209,
23630253-23630665,23631522-23632008,23632623-23633334
Length = 623
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 68 APCPPRQWTQWRHRASGSLSMRHWYLAK-QPCP 163
+PCP W +W + G W LA + CP
Sbjct: 331 SPCPCAMWERWEAKCRGESMNVDWILANTKSCP 363
>09_03_0088 - 12242020-12242941,12243467-12243550,12243591-12244438
Length = 617
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +2
Query: 35 GLPPPTRR--ACVAPCPPRQW 91
GLPPP RR + + P PP QW
Sbjct: 220 GLPPPPRRSMSLLLPPPPAQW 240
>06_01_0499 - 3581145-3582425
Length = 426
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = -1
Query: 558 KGDRRLCTQT------IVAVYFPEKLIEPLQVWLSTRSQHRFRSP*SGWR 427
K RRLC Q A PE ++E + + L +S RFRS WR
Sbjct: 12 KRRRRLCVQVQPAGAGAAAAGIPEDIVEEILLRLPVKSVLRFRSVCKSWR 61
>06_01_0495 - 3546131-3547588
Length = 485
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 567 LPIKGDRRLCTQT-IVAVYFPEKLIEPLQVWLSTRSQHRFRSP*SGWR 427
LP+ RR T A PE +IE + + L +S RFRS WR
Sbjct: 21 LPVAKRRRCVEPTGAAAAGIPEDVIEQILLRLPVKSILRFRSVCKSWR 68
>05_03_0509 + 14858250-14858545,14859139-14859243,14859345-14859912
Length = 322
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 690 DVLYSWQKMIQDCDDHTATYXVTXXG 767
D L + Q+ +Q CDD A+Y VT G
Sbjct: 144 DQLCTAQRQVQRCDDDPASYRVTYIG 169
>05_01_0591 + 5308735-5309178,5309265-5310314
Length = 497
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 503 NLLSPYKSGFRPGHSTVSALLKVVGDIRAGMQDTLASLYRWREEERARG 357
NL + + F P S V L + DI M D +RW ++ER G
Sbjct: 204 NLPHLHHAPFWPRRSLVRRWLNLADDIAMYMFDVDVVCWRWMQQERCAG 252
>04_04_0126 +
22952577-22952871,22952912-22953519,22954125-22954596,
22954882-22954955,22955559-22955937,22956659-22956711
Length = 626
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 249 GCEAGGRAQKPLPPFRHQGLTELLAAQRDLLLHQPRAPC 365
G +A + +P Q L LLAA+R LL + R PC
Sbjct: 554 GADAPDQEPAQIPVHAGQPLARLLAARRSLLRPRLRMPC 592
>05_06_0051 -
25190803-25191216,25191301-25191891,25193248-25193317,
25193392-25193443,25195368-25195440,25195557-25195646
Length = 429
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 29 PRGLPPPTRRACVAPCPPRQ 88
P LPPP RRA P P R+
Sbjct: 205 PASLPPPPRRARAPPSPARE 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,508,233
Number of Sequences: 37544
Number of extensions: 573687
Number of successful extensions: 2134
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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