Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_K18
         (774 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065462-1|BAC05721.1|  964|Homo sapiens seven transmembrane hel...    33   1.5  
AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase k...    31   4.6  

>AB065462-1|BAC05721.1|  964|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 964

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 29  PRGLPPPTRRACVAPC-PPRQWTQWRHRASGSLSMRHWYLAKQPCPDSTCVTLNDRXTVP 205
           PRG PP    A  +PC PP   T + H        R+  L ++PC     V+   R  + 
Sbjct: 491 PRGAPPRPAPARPSPCPPPASATGFSHSNPSYRVPRNPQLCRRPCCQGLRVSHTPRAAIK 550

Query: 206 SP 211
           +P
Sbjct: 551 AP 552


>AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase
           kappa protein.
          Length = 1271

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 143 LAKQPCPDSTCVTLNDRXTVPSPEPVVE 226
           LA  PCP++T  +  +  T P+PEP  E
Sbjct: 61  LAPGPCPEATSESATELYTEPTPEPATE 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,430,077
Number of Sequences: 237096
Number of extensions: 2826819
Number of successful extensions: 8096
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8086
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)